RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 TRIM16O95361 564 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 EML2O95834 649 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 IGLV2-11P01706 119 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ZNF806P0C7X5 589 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GP1BBP13224 206 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 TDGF1P13385 188 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GCFC2P16383 781 aaKnown RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 CSRP1P21291 193 aaKnown RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 PIK3R1P27986 724 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 OAS2P29728 719 aaKnown RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 FRKP42685 505 aaPredicted RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 MAGEA11P43364 429 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 IER3P46695 156 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GLIPR1P48060 266 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CXCL12P48061 93 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 NAPAP54920 295 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ST8SIA6P61647 398 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ASIC1P78348 528 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 PRKCEQ02156 737 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 RASGEF1BQ0VAM2 473 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 HERC3Q15034 1050 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 KIAA1644Q3SXP7 199 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 KBTBD12Q3ZCT8 623 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 PPM1LQ5SGD2 360 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 FAM46CQ5VWP2 391 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CYB5D1Q6P9G0 228 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 RAPH1Q70E73 1250 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CATSPER4Q7RTX7 472 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 SLC16A9Q7RTY1 509 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ANKRD46Q86W74 232 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CROCCP3Q8IVE0 287 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 PRSS35Q8N3Z0 413 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 DCLK2Q8N568 766 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CCDC148Q8NFR7 591 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 KBTBD8Q8NFY9 601 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 CKAP2Q8WWK9 683 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 FGF13Q92913 245 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 C4orf45Q96LM5 186 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GDAP1L1Q96MZ0 367 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 BTBD9Q96Q07 612 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 TEKT3Q9BXF9 490 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 RIMS4Q9H426 269 aaPredicted RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 DHX33Q9H6R0 707 aaKnown RBP3.33□□□□□ -1.88
HERC1-215ENST00000561436 ZFP14Q9HCL3 533 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 SDF2L1Q9HCN8 221 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 SIX2Q9NPC8 291 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 SLCO1C1Q9NYB5 712 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ADAM28Q9UKQ2 775 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 PHLPP2Q6ZVD8 1323 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 ZFHX4Q86UP3 3567 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 FRMPD3Q5JV73 1810 aa3.33□□□□□ -1.88
HERC1-215ENST00000561436 GREB1LQ9C091 1923 aaPredicted RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 LAMA2P24043 3122 aaKnown RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 A0A1B0GUA9 196 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 ARL5CA6NH57 179 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PMS2P5A8MQ11 134 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 C17orf105B2RV13 164 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 NPIPA3F8WFD2 350 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 SLCO1B7G3V0H7 640 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 CHADO15335 359 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 KRT33AO76009 404 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 DDHD2O94830 711 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 RHOBTB1O94844 696 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 ERLIN2O94905 339 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 STBD1O95210 358 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 LYPLA2O95372 231 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 SERPING1P05155 500 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 HMBSP08397 361 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 CEACAM1P13688 526 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PSMC3P17980 439 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 LBPP18428 481 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 CHMLP26374 656 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PSMB4P28070 264 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 OR3A3P47888 321 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 OR1G1P47890 313 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 QARSP47897 775 aaKnown RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 KRTAP10-6P60371 365 aaPredicted RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 FOLH1Q04609 750 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 CETN1Q12798 172 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PPP2R5CQ13362 524 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 TRIM29Q14134 588 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 KARSQ15046 597 aaKnown RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 TEAD2Q15562 447 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 UBE2SQ16763 222 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 C2orf76Q3KRA6 126 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 IQCCQ4KMZ1 466 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 LBHQ53QV2 105 aaPredicted RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 TPGS2Q68CL5 300 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 SLC8B1Q6J4K2 584 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 MACC1Q6ZN28 852 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 GET4Q7L5D6 327 aaPredicted RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 GPR141Q7Z602 305 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PIGWQ7Z7B1 504 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 PIGZQ86VD9 579 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 RALGPS2Q86X27 583 aaPredicted RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 MEX3DQ86XN8 651 aaKnown RBP3.32□□□□□ -1.88
HERC1-215ENST00000561436 SIAH3Q8IW03 269 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 RCOR2Q8IZ40 523 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 KIRREL3Q8IZU9 778 aa3.32□□□□□ -1.88
HERC1-215ENST00000561436 LSMEM2Q8N112 164 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms