RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ACTR3BQ9P1U1 418 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 C5AR2Q9P296 337 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 PACSIN3Q9UKS6 424 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 PCDHB3Q9Y5E6 796 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 SNX13Q9Y5W8 968 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 FER1L5A0AVI2 2057 aa9.71□□□□□ -0.86
USP3-219ENST00000561326 RNF103-CHMP3A0A140T963 221 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 A0A1B0GX78 115 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 H3BMH7 237 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 CTNSO60931 367 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 DNAJB6O75190 326 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 ENTPD5O75356 428 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 PRKRAO75569 313 aaKnown RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 SLITRK5O94991 958 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 C8orf89P0DMQ9 161 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 CRATP43155 626 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 PRIM2P49643 509 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 HSD17B7P56937 341 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 SIM1P81133 766 aaPredicted RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 TXNL4AP83876 142 aaKnown RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 PRR5P85299 388 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 MS4A2Q01362 244 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 STX4Q12846 297 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 SLC13A2Q13183 592 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 RGNQ15493 299 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 CEBPEQ15744 281 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 GTDC1Q4AE62 458 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 RHBDD2Q6NTF9 364 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 AAGABQ6PD74 315 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 PTRH1Q86Y79 214 aaKnown RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 TMEM126BQ8IUX1 230 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 MICU2Q8IYU8 434 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 FAM156AQ8NDB6 213 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 OR5T3Q8NGG3 340 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 SFXN5Q8TD22 340 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 UCN3Q969E3 161 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 AURKBQ96GD4 344 aaPredicted RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 PEX11GQ96HA9 241 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 REXO5Q96IC2 774 aaKnown RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 ZNF681Q96N22 645 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 OR1F2PQ96R84 312 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 CMKLR1Q99788 373 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 PIF1Q9H611 641 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 FBXO8Q9NRD0 319 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 THUMPD1Q9NXG2 353 aaKnown RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 HCN3Q9P1Z3 774 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 MAGEL2Q9UJ55 1249 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 MAP4K5Q9Y4K4 846 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 PCDHGA1Q9Y5H4 931 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 DNAH14Q0VDD8 3507 aa9.7□□□□□ -0.86
USP3-219ENST00000561326 EP300Q09472 2414 aaPredicted RBP9.7□□□□□ -0.86
USP3-219ENST00000561326 SYNDIG1LA6NDD5 238 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 TMEM247A6NEH6 219 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 WASHC1A8K0Z3 465 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 EFCAB7A8K855 629 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 A8MUI8 341 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FAM220BPB1ANY3 271 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FAM227AF5H4B4 570 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 ACOT8O14734 319 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 POLR1CO15160 346 aaPredicted RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 CASC3O15234 703 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 EMC8O43402 210 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 B4GALT2O60909 372 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CBFA2T3O75081 653 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 RFPL3O75679 317 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SORBS2O94875 1100 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 FHP07954 510 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SLC35E2P0CK97 266 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FGF5P12034 268 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CPMP14384 443 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FBLP22087 321 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 CCKBRP32239 447 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 XCR1P46094 333 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 MAPK10P53779 464 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 AP2B1P63010 937 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SNRPNP63162 240 aaKnown RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 MC2RQ01718 297 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FOLH1Q04609 750 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 TP53BP2Q13625 1128 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 DSG2Q14126 1118 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SERTAD2Q14140 314 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SELPLGQ14242 412 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CCDC157Q569K6 752 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 MTX3Q5HYI7 312 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 STPG1Q5TH74 334 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 GLYATQ6IB77 296 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 FAM180BQ6P0A1 224 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 ZFP1Q6P2D0 407 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 TMEM64Q6YI46 380 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 MED25Q71SY5 747 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 C6orf120Q7Z4R8 191 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SPATA24Q86W54 205 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CALHM3Q86XJ0 350 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 CUL9Q8IWT3 2517 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 SLC30A8Q8IWU4 369 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 GOLM1Q8NBJ4 401 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 HIPK4Q8NE63 616 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 BHLHE22Q8NFJ8 381 aaPredicted RBP9.69□□□□□ -0.86
USP3-219ENST00000561326 OR56A1Q8NGH5 318 aa9.69□□□□□ -0.86
USP3-219ENST00000561326 OR52N2Q8NGI0 321 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms