RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZFAND5O76080 213 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 SEMA3DO95025 777 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 KRT6AP02538 564 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 KRT6BP04259 564 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 TNNI3P19429 210 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 GCAP28676 217 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 SOX3P41225 446 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 KRT6CP48668 564 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 TNFRSF17Q02223 184 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ASPHQ12797 758 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 GGTA1PQ4G0N0 100 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 KRTCAP3Q53RY4 240 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 C18orf63Q68DL7 685 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 WDR93Q6P2C0 686 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 GPR180Q86V85 440 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 SPPL2CQ8IUH8 684 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ZCCHC7Q8N3Z6 543 aaKnown RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 TMEM156Q8N614 296 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 MORN4Q8NDC4 146 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF721Q8TF20 911 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 NSUN5Q96P11 429 aaKnown RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ROPN1BQ9BZX4 212 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ROPN1Q9HAT0 212 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ZBTB26Q9HCK0 441 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 SEMA4BQ9NPR2 832 aaPredicted RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 TMEM216Q9P0N5 145 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 MYOTQ9UBF9 498 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 SUCOQ9UBS9 1254 aaKnown RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 YARS2Q9Y2Z4 477 aaKnown RBP14.81□□□□□ -0.04
LMX1B-204ENST00000561065 ATG4BQ9Y4P1 393 aa14.81□□□□□ -0.04
LMX1B-204ENST00000561065 APCP25054 2843 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 A0A0A6YYD5 115 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1B0GTL3 188 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 WASHC1A8K0Z3 465 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 A8MT66 165 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 COPEO14579 308 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 PEX1O43933 1283 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 SBK3P0C264 359 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 MYL2P10916 166 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 PRF1P14222 555 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 CRHR1P34998 444 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 BSGP35613 385 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 HSD17B3P37058 310 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 NEK2P51955 445 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 FOLH1Q04609 750 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 CLCQ05315 142 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 TRAF3Q13114 568 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 CMPK2Q5EBM0 449 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 MRM1Q6IN84 353 aaKnown RBP14.8□□□□□ -0.04
LMX1B-204ENST00000561065 HSDL2Q6YN16 418 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 MRGPRGQ86SM5 289 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 NUDT13Q86X67 352 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 GHDCQ8N2G8 530 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 ZFP62Q8NB50 900 aaPredicted RBP14.8□□□□□ -0.04
LMX1B-204ENST00000561065 PSD4Q8NDX1 1056 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 C16orf52Q8NHV5 167 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 RDH11Q8TC12 318 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 DOK4Q8TEW6 326 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 PELOQ9BRX2 385 aaKnown RBP14.8□□□□□ -0.04
LMX1B-204ENST00000561065 BRF2Q9HAW0 419 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 RYDENQ9NUL5 291 aaKnown RBP14.8□□□□□ -0.04
LMX1B-204ENST00000561065 ADAM29Q9UKF5 820 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 ENTPD4Q9Y227 616 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 NCKAP5O14513 1909 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 ABCA12Q86UK0 2595 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 EXPH5Q8NEV8 1989 aa14.8□□□□□ -0.04
LMX1B-204ENST00000561065 DCHS2Q6V1P9 2916 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 A0A1W2PS29 197 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 TLDC2A0PJX2 215 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 A8MVJ9 347 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 GOLGA8RI6L899 631 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ADAM10O14672 748 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 HS6ST1O60243 411 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 IGKV3-11P04433 115 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 RPS17P08708 135 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 STT3AP46977 705 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 PRKAA2P54646 552 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 PKNOX1P55347 436 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 RNF4P78317 190 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 CFAP157Q5JU67 520 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 C3P1Q6ZMU1 363 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 RPS27LQ71UM5 84 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 C9orf40Q8IXQ3 194 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 GSPT2Q8IYD1 628 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF808Q8N4W9 903 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 CCDC63Q8NA47 563 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 POGLUT1Q8NBL1 392 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 LRRN4CLQ8ND94 238 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 OR4F6Q8NGB9 312 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ZNF483Q8TF39 744 aaPredicted RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ASB15Q8WXK1 588 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 UCN3Q969E3 161 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 MTFMTQ96DP5 389 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ART5Q96L15 291 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 RPF2Q9H7B2 306 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 DDX31Q9H8H2 851 aaKnown RBP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 ANKZF1Q9H8Y5 726 aa14.79□□□□□ -0.04
LMX1B-204ENST00000561065 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.79□□□□□ -0.04
LMX1B-204ENST00000561065 HPF1Q9NWY4 346 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms