RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 TAMM41Q96BW9 452 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ZNF285Q96NJ3 590 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 CCDC3Q9BQI4 270 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ADI1Q9BV57 179 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SERHL2Q9H4I8 314 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ZCCHC3Q9NUD5 404 aaKnown RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 SCOCQ9UIL1 159 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ABCG2Q9UNQ0 655 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 A0A1B0GTW7 788 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SLC9B1P1A6NJY1 282 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 M0QX08 132 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 PDGFBP01127 241 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 FHP07954 510 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 FEN1P39748 380 aaKnown RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 RXRGP48443 463 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ITGA1P56199 1179 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 PPP2R2BQ00005 443 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 TP53BP2Q13625 1128 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 MAPK11Q15759 364 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ZNF750Q32MQ0 723 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SLC36A3Q495N2 470 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 LYSMD4Q5XG99 296 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 PMS2CLQ68D20 193 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 OR2T5Q6IEZ7 315 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 TNFAIP8L2Q6P589 184 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 TMEM154Q6P9G4 183 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 USP53Q70EK8 1073 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 STK32CQ86UX6 486 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 HIPK1Q86Z02 1210 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 MCATQ8IVS2 390 aaKnown RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 ZC3H7AQ8IWR0 971 aaKnown RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 OR56A1Q8NGH5 318 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 OR2T29Q8NH02 315 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 MAGEE2Q8TD90 523 aaPredicted RBP12.17□□□□□ -0.46
SNX1-211ENST00000560829 SLC38A5Q8WUX1 472 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 LZICQ8WZA0 190 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SDCCAG3Q96C92 435 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 SLC35G5Q96KT7 338 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 CNBD2Q96M20 576 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 CD180Q99467 661 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 MAP3K3Q99759 626 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 OSBPL10Q9BXB5 764 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 IL21RQ9HBE5 538 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 NTMQ9P121 344 aa12.17□□□□□ -0.46
SNX1-211ENST00000560829 ARHGEF17Q96PE2 2063 aaPredicted RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 A0A1W2PS29 197 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 TLCD2A6NGC4 264 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 EMC8O43402 210 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 NUDT21O43809 227 aaKnown RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 DNAJB6O75190 326 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 GIMD1P0DJR0 217 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 C8orf89P0DMQ9 161 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 GABRA4P48169 554 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 ANXA11P50995 505 aaKnown RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 IST1P53990 364 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 RPS26P62854 115 aaKnown RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 IFI44LQ53G44 452 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 SHQ1Q6PI26 577 aaKnown RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 PRSS41Q7RTY9 318 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 ARMC8Q8IUR7 673 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 CARFQ8N187 725 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 LRRC25Q8N386 305 aaPredicted RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 SLC25A45Q8N413 288 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 ARL10Q8N8L6 244 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 OR4K14Q8NGD5 310 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 ELP4Q96EB1 424 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 NRBF2Q96F24 287 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 TMEM19Q96HH6 336 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 TPD52L3Q96J77 140 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 CSF3RQ99062 836 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 GABARAPL1Q9H0R8 117 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 EPB41L1Q9H4G0 881 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 IFT80Q9P2H3 777 aaPredicted RBP12.16□□□□□ -0.46
SNX1-211ENST00000560829 BAG5Q9UL15 447 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 NAALAD2Q9Y3Q0 740 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 RNF215Q9Y6U7 377 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 SPACA6W5XKT8 324 aa12.16□□□□□ -0.46
SNX1-211ENST00000560829 RHPN2P1A8MT19 583 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 H0YAE9 185 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 CYR61O00622 381 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 PGM3O95394 542 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 MYF6P23409 242 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 KHKP50053 298 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 PRR5P85299 388 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 BNC1Q01954 994 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 NR1D2Q14995 579 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 GPR19Q15760 415 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 OTUD3Q5T2D3 398 aaPredicted RBP12.15□□□□□ -0.46
SNX1-211ENST00000560829 TSEN54Q7Z6J9 526 aaKnown RBP12.15□□□□□ -0.46
SNX1-211ENST00000560829 TMEM179BQ7Z7N9 219 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 CA13Q8N1Q1 262 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 ELF4Q99607 663 aaPredicted RBP12.15□□□□□ -0.46
SNX1-211ENST00000560829 RBM4BQ9BQ04 359 aaKnown RBP12.15□□□□□ -0.46
SNX1-211ENST00000560829 RBM4Q9BWF3 364 aaKnown RBP12.15□□□□□ -0.46
SNX1-211ENST00000560829 OR51I1Q9H343 314 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 C3orf14Q9HBI5 128 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 ENAMQ9NRM1 1142 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 THSD1Q9NS62 852 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 TMEM74BQ9NUR3 256 aa12.15□□□□□ -0.46
SNX1-211ENST00000560829 VNN3Q9NY84 501 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms