RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 ACSL6Q9UKU0 697 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 RAB23Q9ULC3 237 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TMCC3Q9ULS5 477 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 WDR37Q9Y2I8 494 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 TESMINQ9Y4I5 508 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 OR1A2Q9Y585 309 aa9.2□□□□□ -0.94
RTF1-206ENST00000560447 GPC6Q9Y625 555 aaPredicted RBP9.2□□□□□ -0.94
RTF1-206ENST00000560447 IGKV1-8A0A0C4DH67 115 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PRAMEF33A0A0G2JMD5 474 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 A0A0G2JPF8 293 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PRSS38A1L453 326 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 FAM221BA6H8Z2 402 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 EFCAB10A6NFE3 127 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CLCA1A8K7I4 914 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PDZK1P1A8MUH7 402 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 HNRNPCL2B2RXH8 293 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 HNRNPCL3B7ZW38 293 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ANHXE9PGG2 379 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SYT5O00445 386 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ST8SIA5O15466 376 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 XPNPEP2O43895 674 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 TMPRSS11DO60235 418 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 LCMT2O60294 686 aaKnown RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 PCDHGA12O60330 932 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PRAMEF10O60809 474 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 AGR2O95994 175 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 MT-ND2P03891 347 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 FHP07954 510 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 HNRNPCL4P0DMR1 293 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PIPP12273 146 aaPredicted RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 HOXB2P14652 356 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ZNF12P17014 697 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 GABRB1P18505 474 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 HIST1H1TP22492 207 aaPredicted RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 PSMB5P28074 263 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 HTR1BP28222 390 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CRISP3P54108 245 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 TUBA1BP68363 451 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CYP4F2P78329 520 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PRR5P85299 388 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ALDH6A1Q02252 535 aaKnown RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.19□□□□□ -0.94
RTF1-206ENST00000560447 COX10Q12887 443 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 KIR2DS3Q14952 304 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CLCA4Q14CN2 919 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 TMEM196Q5HYL7 178 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 FGD3Q5JSP0 725 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 NDUFAF5Q5TEU4 345 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ZNF770Q6IQ21 691 aaPredicted RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 DUS1LQ6P1R4 473 aaKnown RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 PARM1Q6UWI2 310 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CD300LDQ6UXZ3 194 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLC16A12Q6ZSM3 486 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 TUBA1AQ71U36 451 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ADCK2Q7Z695 626 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 P2RY8Q86VZ1 359 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLC44A2Q8IWA5 706 aaPredicted RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 TAGAPQ8N103 731 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 IL17RCQ8NAC3 791 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 OR5AK3PQ8NH89 298 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLC38A5Q8WUX1 472 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 GAL3ST3Q96A11 431 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 MS4A6EQ96DS6 147 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 WDR92Q96MX6 357 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 AMDHD1Q96NU7 426 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ALPK1Q96QP1 1244 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 DCUN1D5Q9BTE7 237 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SORBS1Q9BX66 1292 aaKnown RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 DGCR6LQ9BY27 220 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CCDC90BQ9GZT6 254 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 IGFLR1Q9H665 355 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 TRIM45Q9H8W5 580 aaPredicted RBP9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLC28A3Q9HAS3 691 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLAMF7Q9NQ25 335 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 PRDM7Q9NQW5 492 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ERVK-18Q9QC07 812 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ENTPD4Q9Y227 616 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 LIPT1Q9Y234 373 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 RNF6Q9Y252 685 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 KCNK6Q9Y257 313 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SLC9A8Q9Y2E8 581 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 GPSM3Q9Y4H4 160 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 ASB4Q9Y574 426 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 KLK4Q9Y5K2 254 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 SNX8Q9Y5X2 465 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 DSPPQ9NZW4 1301 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 LRP4O75096 1905 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 CCDC88CQ9P219 2028 aa9.19□□□□□ -0.94
RTF1-206ENST00000560447 FEZF1A0PJY2 475 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 OR2A25A4D2G3 310 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 URADA6NGE7 173 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 PRAMEF25A6NGN4 478 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 ZAR1LA6NP61 321 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 RTCAO00442 366 aaKnown RBP9.18□□□□□ -0.94
RTF1-206ENST00000560447 HMGN4O00479 90 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 EMC8O43402 210 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 TNFSF14O43557 240 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 SH3BP5O60239 455 aa9.18□□□□□ -0.94
RTF1-206ENST00000560447 BCAS1O75363 584 aaPredicted RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms