RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 ACAD11Q709F0 780 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 CLNKQ7Z7G1 428 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 MTDHQ86UE4 582 aaKnown RBP12.65□□□□□ -0.38
SMAD3-214ENST00000560402 SCUBE1Q8IWY4 988 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 GPALPP1Q8IXQ4 340 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMAD3-214ENST00000560402 CYP4Z2PQ8N1L4 340 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 KRT78Q8N1N4 520 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 TCAIMQ8N3R3 496 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 CCNYL1Q8N7R7 359 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 APCDD1LQ8NCL9 501 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 OR6Y1Q8NGX8 325 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 STAG3L4Q8TBR4 150 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 LURAP1Q96LR2 239 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 GPR78Q96P69 363 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 DMRTA2Q96SC8 542 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 GATA5Q9BWX5 397 aaPredicted RBP12.65□□□□□ -0.38
SMAD3-214ENST00000560402 DERL2Q9GZP9 239 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 NT5DC2Q9H857 520 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 GPRC5BQ9NZH0 403 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 IKZF3Q9UKT9 509 aa12.65□□□□□ -0.38
SMAD3-214ENST00000560402 CSMD2Q7Z408 3487 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ADGRG4Q8IZF6 3080 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 TRBV11-1A0A0K0K1C0 115 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ANKRD65E5RJM6 399 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 CDC7O00311 574 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 CLDN4O14493 209 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 DLX3O60479 287 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 DNAJB6O75190 326 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 LYPLA1O75608 230 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-214ENST00000560402 WISP2O76076 250 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 MYO1DO94832 1006 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 WDR47O94967 919 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 S100BP04271 92 aaPredicted RBP12.64□□□□□ -0.39
SMAD3-214ENST00000560402 C1GALT1C1LP0DN25 315 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 SERPINB3P29508 390 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 HNF4AP41235 474 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 SLC6A12P48065 614 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 MEOX1P50221 254 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 RPL14P50914 215 aaKnown RBP12.64□□□□□ -0.39
SMAD3-214ENST00000560402 MNAT1P51948 309 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 PGGT1BP53609 377 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 NAGLUP54802 743 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 TMIGD1Q6UXZ0 262 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF227Q86WZ6 799 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 CHERPQ8IWX8 916 aaKnown RBP12.64□□□□□ -0.39
SMAD3-214ENST00000560402 HOMEZQ8IX15 550 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ZNF595Q8IYB9 648 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 C10orf67Q8IYJ2 551 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ARHGAP24Q8N264 748 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 C16orf52Q8NHV5 167 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 RHBDF1Q96CC6 855 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 C14orf79Q96F83 325 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 SPOCK3Q9BQ16 436 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 RASSF4Q9H2L5 321 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 RHBGQ9H310 441 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 EHD1Q9H4M9 534 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 KLHL31Q9H511 634 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ADAP2Q9NPF8 381 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMAD3-214ENST00000560402 COQ3Q9NZJ6 369 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 RNF112Q9ULX5 631 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 ASB1Q9Y576 335 aa12.64□□□□□ -0.39
SMAD3-214ENST00000560402 HDAC3O15379 428 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ERI3O43414 337 aaKnown RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ITM2AO43736 263 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 B3GALT2O43825 422 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 DIAPH2O60879 1101 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 KERAO60938 352 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ITGA10O75578 1167 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 CLEC3AO75596 197 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 WISP3O95389 354 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 CD1DP15813 335 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 CALB2P22676 271 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 PTGS2P35354 604 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ST13P50502 369 aaKnown RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 SSR4P51571 173 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 HSF1Q00613 529 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 GALNT1Q10472 559 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 DLG1Q12959 904 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 SLBPQ14493 270 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 TSNQ15631 228 aaKnown RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ADPRMQ3LIE5 342 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 RNFT1Q5M7Z0 435 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 CDKL4Q5MAI5 379 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 METTL21CQ5VZV1 264 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 TRIM40Q6P9F5 258 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 SLCO4C1Q6ZQN7 724 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 DOLPP1Q86YN1 238 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 TMEM156Q8N614 296 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ZFP62Q8NB50 900 aaPredicted RBP12.63□□□□□ -0.39
SMAD3-214ENST00000560402 C7orf57Q8NEG2 295 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 OR2L5Q8NG80 312 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 FAM57AQ8TBR7 257 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 KIAA1191Q96A73 305 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 MS4A6EQ96DS6 147 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 SORT1Q99523 831 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 AICDAQ9GZX7 198 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 ALG9Q9H6U8 611 aa12.63□□□□□ -0.39
SMAD3-214ENST00000560402 TIMMDC1Q9NPL8 285 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms