RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 TMEM126BQ8IUX1 230 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 RBM12BQ8IXT5 1001 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 CANT1Q8WVQ1 401 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZDHHC3Q9NYG2 299 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 H0YAE9 185 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBFD1O14562 309 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 MAFO75444 373 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ADRA1BP35368 520 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 MLLT10P55197 1068 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 TAF9Q16594 264 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACSBG2Q5FVE4 666 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF679Q8IYX0 411 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 CDK15Q96Q40 435 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 PRDM4Q9UKN5 801 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 A8MVM7 634 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 UPP1Q16831 310 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ANKRD22Q5VYY1 191 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF572Q7Z3I7 529 aaPredicted RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 CPQQ9Y646 472 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SOBPA7XYQ1 873 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARL6IP1Q15041 203 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 REEP3Q6NUK4 255 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 LRFN4Q6PJG9 635 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 PAQR8Q8TEZ7 354 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 RBMXL1Q96E39 390 aaKnown RBP13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC19A3Q9BZV2 496 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 ASTN1O14525 1302 aa13.32□□□□□ -0.28
CSPG4P12-202ENST00000559989 GABRDO14764 452 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 FMO6PO60774 539 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UQCRC2P22695 453 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 KCNJ11Q14654 390 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PAN3Q58A45 887 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 C22orf42Q6IC83 251 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 LANCL3Q6ZV70 420 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 KANSL1Q7Z3B3 1105 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SAT2Q96F10 170 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CNN2Q99439 309 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PKP2Q99959 881 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC29A3Q9BZD2 475 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 WDR26Q9H7D7 661 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 KCNIP2Q9NS61 270 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SPATA31A3Q5VYP0 1347 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 WNT9AO14904 365 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 NDUFV2P19404 249 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TNFSF9P41273 254 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC27A4Q6P1M0 643 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR4Q3Q8NH05 313 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR51Q1Q8NH59 317 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 BIRC8Q96P09 236 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 EBF2Q9HAK2 575 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TXNL4BQ9NX01 149 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 MRPL15Q9P015 296 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 NUBP2Q9Y5Y2 271 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 LATO43561 262 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 POU6F2P78424 691 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR4F3Q6IEY1 312 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TTLL10Q6ZVT0 673 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TMEM150AQ86TG1 271 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 ANKRD13BQ86YJ7 626 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PLD5Q8N7P1 536 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC2A8Q9NY64 477 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SIX4Q9UIU6 781 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF608Q9ULD9 1512 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SEC14L2O76054 403 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 RETP07949 1114 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBBP0CG47 229 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBCP0CG48 685 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 NR4A2P43354 598 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 RPS27AP62979 156 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBA52P62987 128 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 LRRTM4Q86VH4 590 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CHDHQ8NE62 594 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACOT11Q8WXI4 607 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 KIAA1143Q96AT1 154 aaPredicted RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 IL21RQ9HBE5 538 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 C14orf119Q9NWQ9 140 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 GJE1A6NN92 205 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TP53I11O14683 189 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PIGRP01833 764 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CELP19835 753 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBE2G2P60604 165 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 EXOSC6Q5RKV6 272 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CST9LP1Q5W188 147 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 NLRP8Q86W28 1048 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UEVLDQ8IX04 471 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 TMEM185AQ8NFB2 350 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR1E3Q8WZA6 343 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 SPTSSAQ969W0 71 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PELOQ9BRX2 385 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 STRADBQ9C0K7 418 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CERS4Q9HA82 394 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 PRODH2Q9UF12 536 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 FCF1Q9Y324 198 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 CD300LBA8K4G0 201 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 UBE2NP61088 152 aaKnown RBP13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 GHRHRQ02643 423 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 OR10T2Q8NGX3 314 aa13.31□□□□□ -0.28
CSPG4P12-202ENST00000559989 WFIKKN2Q8TEU8 576 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms