RNA–Protein interactions for RNA: ENST00000559974.5

RABGGTA-212, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,963 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-212ENST00000559974 APH1BQ8WW43 257 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 RORBQ92753 470 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 UBE2FQ969M7 185 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 TMEM19Q96HH6 336 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 CSF3RQ99062 836 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 PSD2Q9BQI7 771 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 FGF22Q9HCT0 170 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 ACER3Q9NUN7 267 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 RLIMQ9NVW2 624 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 EHD3Q9NZN3 535 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 SNX11Q9Y5W9 270 aa13.71□□□□□ -0.21
RABGGTA-212ENST00000559974 STK25O00506 426 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 HAT1O14929 419 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 RGS10O43665 173 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 KDM1AO60341 852 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 ZNF182P17025 639 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 CD6P30203 668 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 CCT3P49368 545 aaKnown RBP13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 HMGA2P52926 109 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 CSNK2BP67870 215 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 DUSP7Q16829 419 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 ADPRMQ3LIE5 342 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC16A12Q6ZSM3 486 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 ANKRD13BQ86YJ7 626 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 SVOPQ8N4V2 548 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 OR2L3Q8NG85 312 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 TBC1D15Q8TC07 691 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 IPCEF1Q8WWN9 437 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 UCN3Q969E3 161 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 FAIM2Q9BWQ8 316 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 KLHL31Q9H511 634 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 CD93Q9NPY3 652 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 SCHIP1Q9P0W5 487 aaPredicted RBP13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 ENPP5Q9UJA9 477 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 SCML1Q9UN30 329 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 RNF6Q9Y252 685 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 PCDHGA2Q9Y5H1 932 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 HEBP2Q9Y5Z4 205 aa13.71□□□□□ -0.22
RABGGTA-212ENST00000559974 ZDBF2Q9HCK1 2354 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 FANCMQ8IYD8 2048 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 DNAH14Q0VDD8 3507 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PRSS38A1L453 326 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 HMGN4O00479 90 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 SCAMP1O15126 338 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PDE9AO76083 593 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 GADD45GO95257 159 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 BCL10O95999 233 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 MT-ND2P03891 347 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PEBP1P30086 187 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 AHRP35869 848 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 ENTPD1P49961 510 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 HYAL2Q12891 473 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 TP53BP2Q13625 1128 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 Q6ZPB1 254 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC44A2Q8IWA5 706 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 FBXL6Q8N531 539 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 TBC1D19Q8N5T2 526 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 APOBEC4Q8WW27 367 aaKnown RBP13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 ASB12Q8WXK4 309 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 RAB8BQ92930 207 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 MS4A6EQ96DS6 147 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 OR2M4Q96R27 311 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 NIPSNAP1Q9BPW8 284 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 RHNO1Q9BSD3 238 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 KIR3DX1Q9H7L2 352 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 ZNF556Q9HAH1 456 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PLGRKTQ9HBL7 147 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 ZSCAN32Q9NX65 697 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PNMA8BQ9ULN7 279 aaPredicted RBP13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 HCN4Q9Y3Q4 1203 aa13.7□□□□□ -0.22
RABGGTA-212ENST00000559974 PCDH17O14917 1159 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 ERI3O43414 337 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 CCNB2O95067 398 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MFN2O95140 757 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 STATHP02808 62 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 HOXB3P14651 431 aaPredicted RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MAP2K4P45985 399 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 GSSP48637 474 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MASP1P48740 699 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 KIAA1024LP59773 190 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 MVKQ03426 396 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 BNIP3Q12983 259 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 LRRC32Q14392 662 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 PUM1Q14671 1186 aaKnown RBP eCLIP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 GANABQ14697 944 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC9A5Q14940 896 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 PRSS48Q7RTY5 328 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 P3H2Q8IVL5 708 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 TMEM145Q8NBT3 493 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 OR9Q2Q8NGE9 314 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 FAM81AQ8TBF8 368 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 PHF10Q8WUB8 498 aaKnown RBP13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 TANKQ92844 425 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 AMDHD1Q96NU7 426 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SARGQ9BW04 601 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 GLIPR2Q9H4G4 154 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SERHL2Q9H4I8 314 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SLC35C2Q9NQQ7 365 aa13.69□□□□□ -0.22
RABGGTA-212ENST00000559974 SPHK1Q9NYA1 384 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms