RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 YRDCQ86U90 279 aaKnown RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 TAGAPQ8N103 731 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 FAM71DQ8N9W8 422 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 FAM83FQ8NEG4 500 aaPredicted RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 OR1J4Q8NGS1 313 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 OR14L1PQ8NHC6 308 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 GAL3ST3Q96A11 431 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 STARD4Q96DR4 205 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 IQCDQ96DY2 449 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 DTNBP1Q96EV8 351 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 ADAD1Q96M93 576 aaKnown RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 BIRC8Q96P09 236 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 UCN2Q96RP3 112 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 NTMT1Q9BV86 223 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 UBQLN3Q9H347 655 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 L2HGDHQ9H9P8 463 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 COPS7BQ9H9Q2 264 aaPredicted RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 PROK2Q9HC23 129 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 FAIMQ9NVQ4 179 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 PROCRQ9UNN8 238 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 RNF115Q9Y4L5 304 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 MAGED1Q9Y5V3 778 aaPredicted RBP8.78□□□□□ -1
SMAD3-211ENST00000559460 DOCK7Q96N67 2140 aa8.78□□□□□ -1
SMAD3-211ENST00000559460 EML6Q6ZMW3 1958 aa8.77□□□□□ -1
SMAD3-211ENST00000559460 LOC100289279A0A1B0GTE1 492 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 GOLGA6L9A6NEM1 432 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 FRG2CA6NGY1 282 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 GNB5O14775 395 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 PJA2O43164 708 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 KLF4O43474 513 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 CTNSO60931 367 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 CDH16O75309 829 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 ALDOAP04075 364 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HIST1H2AGP0C0S8 130 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 IGHV4-31P0DP07 118 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HIST1H2ADP20671 130 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HPDP32754 393 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 RPL22P35268 128 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 SRP14P37108 136 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 SCTRP47872 440 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HNRNPFP52597 415 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 PCDH1Q08174 1060 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 GPS1Q13098 491 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 RPS6KA2Q15349 733 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 NTRK2Q16620 822 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 CASC4Q6P4E1 433 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 AAGABQ6PD74 315 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 DNM1P46Q6ZS02 220 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 DEPDC4Q8N2C3 294 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 ABHD11Q8NFV4 315 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 CCT6BQ92526 530 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 LPGAT1Q92604 370 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 GCDHQ92947 438 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HIST1H2AHQ96KK5 128 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 DGAT2Q96PD7 388 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 TCF12Q99081 682 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 HIST1H2AJQ99878 128 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 AIF1LQ9BQI0 150 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 H2AFJQ9BTM1 129 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 NAT10Q9H0A0 1025 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 PRM3Q9NNZ6 103 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 ZNHIT6Q9NWK9 470 aaKnown RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 TEX10Q9NXF1 929 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 GDF2Q9UK05 429 aaPredicted RBP8.77□□□□□ -1.01
SMAD3-211ENST00000559460 NENFQ9UMX5 172 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 MAD1L1Q9Y6D9 718 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 SPACA6W5XKT8 324 aa8.77□□□□□ -1.01
SMAD3-211ENST00000559460 NCKAP5O14513 1909 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 A0A0G2JN53 185 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 IQANK1A0A1B0GTG1 560 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 A0A1B0GTH6 734 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 SLC22A20A6NK97 555 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 SMTNL1A8MU46 457 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 BTNL10A8MVZ5 291 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 CDC7O00311 574 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 PLOD2O00469 737 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 ERI3O43414 337 aaKnown RBP8.76□□□□□ -1.01
SMAD3-211ENST00000559460 OR10H2O60403 315 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 NDUFS7O75251 213 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 TJP3O95049 919 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 FTCDO95954 541 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 CD3EP07766 207 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 SERPINA6P08185 405 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 KRT15P19012 456 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 SLC6A12P48065 614 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 RUNX2Q13950 521 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 MIDNQ504T8 468 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 PCID2Q5JVF3 399 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 LRRC8EQ6NSJ5 796 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 ADAM5Q6NVV9 412 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 TRIM40Q6P9F5 258 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 ADGRE4PQ86SQ3 457 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 KIAA1328Q86T90 577 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 IFNEQ86WN2 208 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 C9orf40Q8IXQ3 194 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 PLD6Q8N2A8 252 aaKnown RBP8.76□□□□□ -1.01
SMAD3-211ENST00000559460 TMEM52Q8NDY8 209 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 OR4K1Q8NGD4 311 aa8.76□□□□□ -1.01
SMAD3-211ENST00000559460 ZNF721Q8TF20 911 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms