RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 PROCP04070 461 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SP1P08047 785 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 UROSP10746 265 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ZNF24P17028 368 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 DDX5P17844 614 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 SERPINB3P29508 390 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GALNSP34059 522 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MPIP34949 423 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TRHRP34981 398 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 BSGP35613 385 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SERPINB5P36952 375 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 UQCRFS1P47985 274 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ALDH9A1P49189 494 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TMED10P49755 219 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 HLCSP50747 726 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GPR143P51810 404 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 XKP51811 444 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 HNRNPFP52597 415 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 HNRNPH2P55795 449 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 PER3P56645 1201 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 NRG3P56975 720 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MLF1P58340 268 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 RNF4P78317 190 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ALDH6A1Q02252 535 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 ID2Q02363 134 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SRSF11Q05519 484 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 SLC18A2Q05940 514 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TBL3Q12788 808 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 MRPL49Q13405 166 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 ZNF267Q14586 743 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 NR6A1Q15406 480 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MPEG1Q2M385 716 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 EIF2S3LQ2VIR3 472 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 KRT71Q3SY84 523 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 KRTCAP3Q53RY4 240 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 HLA-DQA1Q5Y7H0 255 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MRM1Q6IN84 353 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 SLC25A25Q6KCM7 469 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 OPN5Q6U736 354 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GFRALQ6UXV0 394 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 FRMD7Q6ZUT3 714 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SH2D5Q6ZV89 423 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 RPS27LQ71UM5 84 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 SLC29A4Q7RTT9 530 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GALNTL5Q7Z4T8 443 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 C10orf107Q8IVU9 208 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 OR4N5Q8IXE1 308 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GALNT12Q8IXK2 581 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 DND1Q8IYX4 353 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 EID3Q8N140 333 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 CYP4Z2PQ8N1L4 340 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ARMC10Q8N2F6 343 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 METTL4Q8N3J2 472 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 KIF2BQ8N4N8 673 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MREGQ8N565 214 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 C1orf52Q8N6N3 182 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 BANPQ8N9N5 519 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TMEM52Q8NDY8 209 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 NFAM1Q8NET5 270 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 OR2W6PQ8NHA6 318 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 PPP1R14CQ8TAE6 165 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 NUBPLQ8TB37 319 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SLC22A8Q8TCC7 542 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 AENQ8WTP8 325 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 MZB1Q8WU39 189 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 NR4A3Q92570 626 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ANKRD9Q96BM1 317 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 PPWD1Q96BP3 646 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 FBXL20Q96IG2 436 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 APOPT1Q96IL0 206 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SGCZQ96LD1 299 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SIGLEC12Q96PQ1 595 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 HBEGFQ99075 208 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SORBS1Q9BX66 1292 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 ZNF717Q9BY31 904 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 ACPTQ9BZG2 426 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 STMN4Q9H169 189 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 CENPHQ9H3R5 247 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 GSTO2Q9H4Y5 243 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 TRIM45Q9H8W5 580 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 TIMMDC1Q9NPL8 285 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 PFDN4Q9NQP4 134 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 FARSBQ9NSD9 589 aaKnown RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 GIMAP4Q9NUV9 329 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 OXSMQ9NWU1 459 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 MKS1Q9NXB0 559 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SEC14L3Q9UDX4 400 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.07□□□□□ -1.76
SNX1-205ENST00000559339 UTS2RQ9UKP6 389 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 CFL2Q9Y281 166 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 KLF13Q9Y2Y9 288 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 PLLPQ9Y342 182 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 ASB4Q9Y574 426 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 V9GYY5 206 aaPredicted RBP4.07□□□□□ -1.76
SNX1-205ENST00000559339 RELNP78509 3460 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 SCN3AQ9NY46 2000 aa4.07□□□□□ -1.76
SNX1-205ENST00000559339 CCDC88CQ9P219 2028 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 FLNBO75369 2602 aaKnown RBP4.06□□□□□ -1.76
SNX1-205ENST00000559339 A0A1B0GTL3 188 aa4.06□□□□□ -1.76
SNX1-205ENST00000559339 MYOCOSA0A1B0GUC4 107 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms