RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 CDCP1Q9H5V8 836 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 EPS8L2Q9H6S3 715 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 NMRK1Q9NWW6 199 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 ANKRD10Q9NXR5 420 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 ANAPC2Q9UJX6 822 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 CROCCQ5TZA2 2017 aa17.43■□□□□ 0.38
CASC4-209ENST00000559222 SPTA1P02549 2419 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 TMEM200CA6NKL6 621 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 BIRC5O15392 142 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 SKAP2O75563 359 aaPredicted RBP17.42■□□□□ 0.38
CASC4-209ENST00000559222 RSL1D1O76021 490 aaKnown RBP17.42■□□□□ 0.38
CASC4-209ENST00000559222 SERPINE1P05121 402 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 TNNI3P19429 210 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 ALDH9A1P49189 494 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 TLE1Q04724 770 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 TERF2Q15554 542 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 SLC48A1Q6P1K1 146 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 OR14A16Q8NHC5 309 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 CDC26Q8NHZ8 85 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 PPP1R14CQ8TAE6 165 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 ZNF721Q8TF20 911 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 PNPLA2Q96AD5 504 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 C3orf30Q96M34 536 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 LMF1Q96S06 567 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 SORT1Q99523 831 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 WDR41Q9HAD4 459 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 B3GNT3Q9Y2A9 372 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 DLGAP4Q9Y2H0 992 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 SHANK1Q9Y566 2161 aa17.42■□□□□ 0.38
CASC4-209ENST00000559222 GNG14A0A1W2PPG7 69 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 GOLGA6L10A6NI86 522 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 CLPSP04118 112 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 FGF4P08620 206 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 ANXA4P09525 319 aaPredicted RBP17.41■□□□□ 0.38
CASC4-209ENST00000559222 CT62P0C5K7 136 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 TACR1P25103 407 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 SOX18P35713 384 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 KIAA0040Q15053 153 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 AGBL2Q5U5Z8 902 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 ABHD17BQ5VST6 288 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 GALNT18Q6P9A2 607 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 ZNF605Q86T29 641 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 DDIASQ8IXT1 998 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 TMEM132CQ8N3T6 1108 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 ZNF781Q8N8C0 355 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 VMP1Q96GC9 406 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 HES7Q9BYE0 225 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 STMN4Q9H169 189 aaPredicted RBP17.41■□□□□ 0.38
CASC4-209ENST00000559222 SIRT5Q9NXA8 310 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 STMN3Q9NZ72 180 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 EXO1Q9UQ84 846 aaKnown RBP17.41■□□□□ 0.38
CASC4-209ENST00000559222 NTNG1Q9Y2I2 539 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 CLCA3PQ9Y6N3 262 aa17.41■□□□□ 0.38
CASC4-209ENST00000559222 C1orf226A1L170 272 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 GABRR3A8MPY1 467 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 LSM1O15116 133 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 KLHL41O60662 606 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 HSPA4LO95757 839 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 SERPINB5P36952 375 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 FEN1P39748 380 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 CLCN2P51788 898 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 MLF1P58340 268 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ABCE1P61221 599 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 TRA2BP62995 288 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 AP2B1P63010 937 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ERVK-8P63133 956 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ARG2P78540 354 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 PLIN5Q00G26 463 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 BST1Q10588 318 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 NR6A1Q15406 480 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 LTB4RQ15722 352 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 XKR7Q5GH72 579 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 HHATQ5VTY9 493 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 NOXRED1Q6NXP6 359 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 RNF165Q6ZSG1 346 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 RPS19BP1Q86WX3 136 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 HPS6Q86YV9 775 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ST13P4Q8IZP2 240 aaPredicted RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 CLYBLQ8N0X4 340 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 MORN4Q8NDC4 146 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 TM9SF4Q92544 642 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 C19orf60Q96EN9 201 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 CNRIP1Q96F85 164 aaPredicted RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 EGLN2Q96KS0 407 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ZNF354BQ96LW1 612 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 SIGLEC12Q96PQ1 595 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 SH3GL2Q99962 352 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 DEFB126Q9BYW3 111 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ILKAPQ9H0C8 392 aaPredicted RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 LRTM1Q9HBL6 345 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 EML4Q9HC35 981 aaKnown RBP17.4■□□□□ 0.38
CASC4-209ENST00000559222 ERVK-19Q9WJR5 959 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 PCDHGA10Q9Y5H3 936 aa17.4■□□□□ 0.38
CASC4-209ENST00000559222 ATP6AP2A0A1C7CYW4 349 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 TMEM114B3SHH9 223 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 SLC28A1O00337 649 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 OR10H2O60403 315 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ZNF354AO60765 605 aaPredicted RBP17.39■□□□□ 0.37
CASC4-209ENST00000559222 SEC22BO75396 215 aa17.39■□□□□ 0.37
CASC4-209ENST00000559222 ERAL1O75616 437 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms