RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 EXOSC8Q96B26 276 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 ING2Q9H160 280 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ANKRA2Q9H9E1 313 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ZBTB20Q9HC78 741 aaPredicted RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 PNO1Q9NRX1 252 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 MS4A12Q9NXJ0 267 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ASIC5Q9NY37 505 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 VTI1BQ9UEU0 232 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 RALYQ9UKM9 306 aaKnown RBP10.18□□□□□ -0.78
TPM1-217ENST00000559108 ERVK-11Q9UQG0 969 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 ZFYVE26Q68DK2 2539 aa10.18□□□□□ -0.78
TPM1-217ENST00000559108 NSG1A0A0A6YYJ2 146 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 C1orf226A1L170 272 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 SAGE2PA6NJ88 616 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 CEACAM4O75871 244 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 MYO1DO94832 1006 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 HPP00738 406 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 IGHEP01854 428 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 CYC1P08574 325 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 FAM87AP0C7U9 286 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 CPMP14384 443 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 DDCP20711 480 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 IL12AP29459 219 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 FEN1P39748 380 aaKnown RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 BUD31P41223 144 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 STT3AP46977 705 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 AQP5P55064 265 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 OR4D2P58180 307 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 ERVK-8P63133 956 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 PHC1P78364 1004 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 CEBPEQ15744 281 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 LSM12Q3MHD2 195 aaKnown RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 B3GNTL1Q67FW5 361 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 FAM111BQ6SJ93 734 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 C16orf47Q6ZP98 133 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 NDUFAF7Q7L592 441 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 GPR155Q7Z3F1 870 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 APLFQ8IW19 511 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 ARFGAP2Q8N6H7 521 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 ZSCAN1Q8NBB4 408 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 APCDD1LQ8NCL9 501 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 FDCSPQ8NFU4 85 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 OR7A2PQ8NGA2 310 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 THAP4Q8WY91 577 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 TANKQ92844 425 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 CIDECQ96AQ7 238 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 METTL2AQ96IZ6 378 aaKnown RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 BBC3Q96PG8 261 aaPredicted RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 NUDT9Q9BW91 350 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 TRIM4Q9C037 500 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 NPHS2Q9NP85 383 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 RIC8BQ9NVN3 520 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 AIG1Q9NVV5 245 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 UTS2RQ9UKP6 389 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 PPIEQ9UNP9 301 aaKnown RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 MRPS33Q9Y291 106 aaKnown RBP10.17□□□□□ -0.78
TPM1-217ENST00000559108 GPR45Q9Y5Y3 372 aa10.17□□□□□ -0.78
TPM1-217ENST00000559108 NUP214P35658 2090 aaPredicted RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 TMEM200CA6NKL6 621 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 A6NL46 340 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 GABRR3A8MPY1 467 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 CLDN4O14493 209 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ZNF354AO60765 605 aaPredicted RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 DIAPH2O60879 1101 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ERAL1O75616 437 aaKnown RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 C1QCP02747 245 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 IGKV3-11P04433 115 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 LAMP1P11279 417 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 LBPP18428 481 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 S1PR1P21453 382 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 CD97P48960 835 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 XKP51811 444 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 SEC24CP53992 1094 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 POLE2P56282 527 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 NME5P56597 212 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 WNT3P56703 355 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 STX4Q12846 297 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ELAVL1Q15717 326 aaKnown RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 FCRLBQ6BAA4 426 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 TMEM132CQ8N3T6 1108 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ADCY4Q8NFM4 1077 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 OR9I1Q8NGQ6 314 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 BRIX1Q8TDN6 353 aaKnown RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 ACTRT2Q8TDY3 377 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ELP5Q8TE02 316 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ZNF721Q8TF20 911 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 METTL21AQ8WXB1 218 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 NCLNQ969V3 563 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 NACC2Q96BF6 587 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 KLHL29Q96CT2 875 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 SEMA4CQ9C0C4 833 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 REEP4Q9H6H4 257 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 ADAP2Q9NPF8 381 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 MAT2BQ9NZL9 334 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 DCTN4Q9UJW0 460 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 G3BP2Q9UN86 482 aaKnown RBP10.16□□□□□ -0.78
TPM1-217ENST00000559108 TMED5Q9Y3A6 229 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 SPACA6W5XKT8 324 aa10.16□□□□□ -0.78
TPM1-217ENST00000559108 EML6Q6ZMW3 1958 aa10.15□□□□□ -0.78
TPM1-217ENST00000559108 BSNQ9UPA5 3926 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms