RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 SEC22BO75396 215 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 SKAP2O75563 359 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ERAL1O75616 437 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 RSL1D1O76021 490 aaKnown RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 SERPINE1P05121 402 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 IL3P08700 152 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ANXA4P09525 319 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 DHRS4L1P0CG22 281 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 H2AFXP16104 143 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 SERPINB5P36952 375 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 NR6A1Q15406 480 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 MEP1AQ16819 746 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ZNF750Q32MQ0 723 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 PLEKHN1Q494U1 663 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 H3F3CQ6NXT2 135 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 FAM180BQ6P0A1 224 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 HDXQ7Z353 690 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 TRIM46Q7Z4K8 759 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 TLCD1Q96CP7 247 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 KLHL29Q96CT2 875 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 CNPPD1Q9BV87 410 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 FAIM2Q9BWQ8 316 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 TUBB1Q9H4B7 451 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ZNF395Q9H8N7 513 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ABI3Q9P2A4 366 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 ZNF223Q9UK11 482 aaPredicted RBP14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 DLGAP4Q9Y2H0 992 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 PCDHA9Q9Y5H5 950 aa14.78□□□□□ -0.04
RABGGTA-206ENST00000558649 COL6A6A6NMZ7 2263 aa14.77□□□□□ -0.04
RABGGTA-206ENST00000558649 BSNQ9UPA5 3926 aa14.77□□□□□ -0.04
RABGGTA-206ENST00000558649 PIP5K1BO14986 540 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 DYRK3O43781 588 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 PLA2G2AP14555 144 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 TRA2BP62995 288 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 ZNF169Q14929 603 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 GALNTL6Q49A17 601 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 PRR30Q53SZ7 412 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 SLC48A1Q6P1K1 146 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 Q6ZS92 163 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 RPS19BP1Q86WX3 136 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 ST13P4Q8IZP2 240 aaPredicted RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 CLYBLQ8N0X4 340 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 Q8NA96 180 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 MORN4Q8NDC4 146 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 OR4K14Q8NGD5 310 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 OR1N1Q8NGS0 311 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 OR2T11Q8NH01 316 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 C16orf78Q8WTQ4 265 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 ARL8AQ96BM9 186 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 LIN28AQ9H9Z2 209 aaKnown RBP14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 PFDN4Q9NQP4 134 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 NKIRAS1Q9NYS0 192 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 HEY2Q9UBP5 337 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 COPS7AQ9UBW8 275 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 ZDHHC2Q9UIJ5 367 aa14.77□□□□□ -0.05
RABGGTA-206ENST00000558649 TLN1Q9Y490 2541 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 OR5H15A6NDH6 313 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 GABRR3A8MPY1 467 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 TMEM114B3SHH9 223 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 HRKO00198 91 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 PRKNO60260 465 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 SORBS2O94875 1100 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 DDAH2O95865 285 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 FGF4P08620 206 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 PTGER1P34995 402 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 FEN1P39748 380 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 XKP51811 444 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 ABCE1P61221 599 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 ERVK-8P63133 956 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 RPL38P63173 70 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 OC90Q02509 493 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 ZNF763Q0D2J5 394 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 ZNF267Q14586 743 aaPredicted RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 TLR1Q15399 786 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 C6orf163Q5TEZ5 329 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 AGBL2Q5U5Z8 902 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 GOLGA6L1Q8N7Z2 621 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 OR6Y1Q8NGX8 325 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 RIT1Q92963 219 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 EXOSC8Q96B26 276 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 PELOQ9BRX2 385 aaKnown RBP14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 LRTM1Q9HBL6 345 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 C1orf109Q9NX04 203 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 ERVK-19Q9WJR5 959 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 CCL27Q9Y4X3 112 aa14.76□□□□□ -0.05
RABGGTA-206ENST00000558649 FCHO1O14526 889 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 SLC35E2P0CK97 266 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 CPMP14384 443 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 NT5EP21589 574 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 SLC1A6P48664 564 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 TNFSF10P50591 281 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 GPR143P51810 404 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 WDR4P57081 412 aaKnown RBP14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 MLF1P58340 268 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 STX3Q13277 289 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 BIKQ13323 160 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 TUBA3CQ13748 450 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 UGT3A2Q3SY77 523 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 NOXRED1Q6NXP6 359 aa14.75□□□□□ -0.05
RABGGTA-206ENST00000558649 GALNT18Q6P9A2 607 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms