RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 MORN4Q8NDC4 146 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 OR4K14Q8NGD5 310 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 C16orf78Q8WTQ4 265 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 PTPMT1Q8WUK0 201 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 NCLNQ969V3 563 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 PPWD1Q96BP3 646 aaKnown RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 C11orf24Q96F05 449 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 VMP1Q96GC9 406 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 ATP6V1G3Q96LB4 118 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 ZNF354BQ96LW1 612 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 PELOQ9BRX2 385 aaKnown RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 OR8D2Q9GZM6 311 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 LRTM1Q9HBL6 345 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 SIRT5Q9NXA8 310 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 PPIEQ9UNP9 301 aaKnown RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 DLGAP4Q9Y2H0 992 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 CCL27Q9Y4X3 112 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 POLR3HQ9Y535 204 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-205ENST00000558428 CSAG2Q9Y5P2 127 aa11.53□□□□□ -0.56
SMAD3-205ENST00000558428 NBASA2RRP1 2371 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 A0A1W2PS29 197 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SUV39H1O43463 412 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 DYRK3O43781 588 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SKAP2O75563 359 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ERAL1O75616 437 aaKnown RBP11.52□□□□□ -0.57
SMAD3-205ENST00000558428 F10P00742 488 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ANXA4P09525 319 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-205ENST00000558428 PRPH2P23942 346 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SLC1A6P48664 564 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 GPR143P51810 404 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 XKP51811 444 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF763Q0D2J5 394 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 STX3Q13277 289 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 MEP1AQ16819 746 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 TTMPQ5BVD1 217 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ACER2Q5QJU3 275 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SLC6A19Q695T7 634 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SLC48A1Q6P1K1 146 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 Q6ZSR9 355 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 CRLF3Q8IUI8 442 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 OR2T11Q8NH01 316 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 CDC26Q8NHZ8 85 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 FAM76AQ8TAV0 307 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 SLC2A12Q8TD20 617 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 PNPLA2Q96AD5 504 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 DEFB126Q9BYW3 111 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ILKAPQ9H0C8 392 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-205ENST00000558428 CDCP1Q9H5V8 836 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF395Q9H8N7 513 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-205ENST00000558428 C1orf109Q9NX04 203 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 PLA2G3Q9NZ20 509 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 STMN3Q9NZ72 180 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 LUZP4Q9P127 313 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 ABI3Q9P2A4 366 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 HEY2Q9UBP5 337 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 PSME2Q9UL46 239 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 B3GNT3Q9Y2A9 372 aa11.52□□□□□ -0.57
SMAD3-205ENST00000558428 PRRC2CQ9Y520 2896 aaKnown RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 NPIPB8E9PQR5 432 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SLC28A2O43868 658 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 MAN1A2O60476 641 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SNUPNO95149 360 aaKnown RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 DDAH2O95865 285 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 WDPCPO95876 746 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SLC35E2P0CK97 266 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 DRD2P14416 443 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 CASRP41180 1078 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 GSTM5P46439 218 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 RPL38P63173 70 aaKnown RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 HEPACAMQ14CZ8 416 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 KIAA0040Q15053 153 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF750Q32MQ0 723 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 GALNTL6Q49A17 601 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 NOXRED1Q6NXP6 359 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 DGAT2L6Q6ZPD8 337 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 Q6ZS92 163 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF605Q86T29 641 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 RPS19BP1Q86WX3 136 aaKnown RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 BEST3Q8N1M1 668 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF781Q8N8C0 355 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF321PQ8N8H1 164 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 OR1N1Q8NGS0 311 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 DOK4Q8TEW6 326 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 THAP3Q8WTV1 239 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 RIT1Q92963 219 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 KLHL29Q96CT2 875 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 METTL2AQ96IZ6 378 aaKnown RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ART5Q96L15 291 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SORT1Q99523 831 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 NPAS2Q99743 824 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SH3GL2Q99962 352 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 CNPPD1Q9BV87 410 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 C20orf27Q9GZN8 174 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 SLAMF7Q9NQ25 335 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 COPS7AQ9UBW8 275 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 ZNF223Q9UK11 482 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-205ENST00000558428 UTS2RQ9UKP6 389 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 CES1P1Q9UKY3 287 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 RAP2CQ9Y3L5 183 aa11.51□□□□□ -0.57
SMAD3-205ENST00000558428 RP1L1Q8IWN7 2480 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms