RNA–Protein interactions for RNA: ENST00000558400.1

TPM1-213, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-213ENST00000558400 SORBS1Q9BX66 1292 aaKnown RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 MRPL1Q9BYD6 325 aaKnown RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 GSTO2Q9H4Y5 243 aa7.91□□□□□ -1.14
TPM1-213ENST00000558400 TRIM45Q9H8W5 580 aaPredicted RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 EML4Q9HC35 981 aaKnown RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 FARSBQ9NSD9 589 aaKnown RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 MAP10Q9P2G4 905 aa7.91□□□□□ -1.14
TPM1-213ENST00000558400 COPS7AQ9UBW8 275 aa7.91□□□□□ -1.14
TPM1-213ENST00000558400 YARS2Q9Y2Z4 477 aaKnown RBP7.91□□□□□ -1.14
TPM1-213ENST00000558400 PCSK5Q92824 1860 aa7.91□□□□□ -1.14
TPM1-213ENST00000558400 SCN2AQ99250 2005 aa7.91□□□□□ -1.14
TPM1-213ENST00000558400 TRBV11-1A0A0K0K1C0 115 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 A0A1B0GTL3 188 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 CLEC18AA5D8T8 446 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 GOLGA6L10A6NI86 522 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 GABRR3A8MPY1 467 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 FOXO6A8MYZ6 492 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 CTIFO43310 598 aaKnown RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 FGF17O60258 216 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 OR10H2O60403 315 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 NPHS1O60500 1241 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 PRAMEF2O60811 474 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 RASAL1O95294 804 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 CHEK2O96017 543 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 FGF4P08620 206 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 MYZAPP0CAP1 466 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 DRD2P14416 443 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TPP2P29144 1249 aaPredicted RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 TRHRP34981 398 aaPredicted RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 HLCSP50747 726 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ACSM2AQ08AH3 577 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TBL3Q12788 808 aaKnown RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 TUBA3CQ13748 450 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ELOAQ14241 798 aaKnown RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 HEPACAMQ14CZ8 416 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ZNF766Q5HY98 468 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 NDUFAF5Q5TEU4 345 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ACSM2BQ68CK6 577 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 C18orf63Q68DL7 685 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 SLC25A25Q6KCM7 469 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 GALNT18Q6P9A2 607 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TUBA3EQ6PEY2 450 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 CLEC18BQ6UXF7 455 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 LRIG3Q6UXM1 1119 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 COMMD6Q7Z4G1 85 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TRIM46Q7Z4K8 759 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 C10orf107Q8IVU9 208 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 OR4N5Q8IXE1 308 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 GPALPP1Q8IXQ4 340 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 BEST3Q8N1M1 668 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TMEM156Q8N614 296 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 FAM98AQ8NCA5 519 aaKnown RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 CLEC18CQ8NCF0 446 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 FAM76AQ8TAV0 307 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TCP10LQ8TDR4 215 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 RIT1Q92963 219 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TM4SF18Q96CE8 201 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 PKNOX2Q96KN3 472 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 C5orf34Q96MH7 638 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 SHCBP1LQ9BZQ2 653 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 OR8D2Q9GZM6 311 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 STMN4Q9H169 189 aaPredicted RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 SSU72Q9NP77 194 aaKnown RBP7.9□□□□□ -1.14
TPM1-213ENST00000558400 PFDN4Q9NQP4 134 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ASF1BQ9NVP2 202 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 SIRT5Q9NXA8 310 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 LUZP4Q9P127 313 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 LRFN1Q9P244 771 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 MYOTQ9UBF9 498 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 MCM8Q9UJA3 840 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 TIMM22Q9Y584 194 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 ACTL7BQ9Y614 415 aa7.9□□□□□ -1.14
TPM1-213ENST00000558400 GNG14A0A1W2PPG7 69 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 OR6C76A6NM76 312 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 TGFBR3LH3BV60 316 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SLC28A1O00337 649 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 UBFD1O14562 309 aaKnown RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 PGRMC2O15173 223 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 ITGA10O75578 1167 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SNUPNO95149 360 aaKnown RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 CBX6O95503 412 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 AIFM1O95831 613 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 GBAP04062 536 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SP1P08047 785 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 PORP16435 677 aaPredicted RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 CSNK2A2P19784 350 aaPredicted RBP7.89□□□□□ -1.15
TPM1-213ENST00000558400 SSR4P51571 173 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 XKP51811 444 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 RNF4P78317 190 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 ZNF844Q08AG5 666 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 OR1C1Q15619 314 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 IMPG1Q17R60 797 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 MPEG1Q2M385 716 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SPRED3Q2MJR0 410 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 SPDYAQ5MJ70 313 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 CEP85LQ5SZL2 805 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 C6orf163Q5TEZ5 329 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 FCRLBQ6BAA4 426 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 OPN5Q6U736 354 aa7.89□□□□□ -1.15
TPM1-213ENST00000558400 RNF165Q6ZSG1 346 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms