RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 SSTP61278 116 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 LSAMPQ13449 338 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 PTERQ96BW5 349 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 FAM83CQ9BQN1 747 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 RASAL1O95294 804 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 EOMESO95936 686 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MAPK3P27361 379 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 GABRA3P34903 492 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 SNTB2Q13425 540 aaKnown RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 GAS6Q14393 721 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 GTPBP8Q8N3Z3 284 aaPredicted RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 ZNF283Q8N7M2 679 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 MAPK15Q8TD08 544 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 SULT4A1Q9BR01 284 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
SPG11-210ENST00000558319 AFDNP55196 1824 aaKnown RBP13.4□□□□□ -0.26
SPG11-210ENST00000558319 A0A1W2PQ45 241 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 A0A1W2PQY0 241 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 TPPPO94811 219 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 HOXD12P35452 270 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 PRKXP51817 358 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 EXOC3L2Q2M3D2 409 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 SHFQ7M4L6 423 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 PLD6Q8N2A8 252 aaKnown RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 MARVELD2Q8N4S9 558 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 KRTCAP2Q8N6L1 136 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 CCDC106Q9BWC9 280 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 B3GALT1Q9Y5Z6 326 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 GABRDO14764 452 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RAD1O60671 282 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 AHSA1O95433 338 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 OR12D1P0DN82 309 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 GP1BBP13224 206 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 IDH3GP51553 393 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 DPY19L4Q7Z388 723 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RHBDF1Q96CC6 855 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 TDP1Q9NUW8 608 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 OR1A2Q9Y585 309 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 ARPC5O15511 151 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RETP07949 1114 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 TAS2R43P59537 309 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 IER5LQ5T953 404 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 DNM1P34Q6PK57 102 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 TREML1Q86YW5 311 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RIT1Q92963 219 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 STARD5Q9NSY2 213 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 IL3P08700 152 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 AMY2BP19961 511 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 UGT2B10P36537 528 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 PTH2RP49190 550 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RAET1LQ5VY80 246 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 DRICH1Q6PGQ1 229 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 GKN2Q86XP6 184 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 TRUB1Q8WWH5 349 aaKnown RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 SCAMP4Q969E2 229 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 WASF3Q9UPY6 502 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 DFNA5O60443 496 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 RAB6AP20340 208 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 ZXDBP98169 803 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 C18orf21Q32NC0 220 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 NANOGP8Q6NSW7 305 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 C14orf80Q86SX3 495 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 NANOGQ9H9S0 305 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 CDC14AQ9UNH5 594 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 ACTL7AQ9Y615 435 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 HCRTR2O43614 444 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 OR8U9P0C7N5 309 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 UNGP13051 313 aaPredicted RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 TMEM107Q6UX40 140 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 CARM1Q86X55 608 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 ARHGAP12Q8IWW6 846 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 CELF5Q8N6W0 485 aaKnown RBP13.39□□□□□ -0.27
SPG11-210ENST00000558319 CDKN2AIPNLQ96HQ2 116 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 OR4K3Q96R72 315 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 HINT2Q9BX68 163 aa13.39□□□□□ -0.27
SPG11-210ENST00000558319 LMTK2Q8IWU2 1503 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 CIB4A0PJX0 185 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZNF850A8MQ14 1090 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ITGB8P26012 769 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 PTGER1P34995 402 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GJA5P36382 358 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 GHRHRQ02643 423 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ATP6AP1Q15904 470 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 DECR1Q16698 335 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 LRIT3Q3SXY7 679 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZC3H14Q6PJT7 736 aaKnown RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 MEX3DQ86XN8 651 aaKnown RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 OR4D6Q8NGJ1 314 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 BADQ92934 168 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 NINJ1Q92982 152 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 ZNF486Q96H40 463 aaPredicted RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 COQ10AQ96MF6 247 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 FAM118AQ9NWS6 357 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 CASC3O15234 703 aaKnown RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 CD34P28906 385 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 CAV3P56539 151 aa13.38□□□□□ -0.27
SPG11-210ENST00000558319 HNRNPDQ14103 355 aaKnown RBP13.38□□□□□ -0.27
SPG11-210ENST00000558319 TICAM1Q8IUC6 712 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms