RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 SNX6Q9UNH7 406 aa15.53■□□□□ 0.08
NEK9-211ENST00000557673 SETD2Q9BYW2 2564 aaPredicted RBP15.53■□□□□ 0.08
NEK9-211ENST00000557673 A0A0G2JN53 185 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 MANBAO00462 879 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 ASNA1O43681 348 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 B4GALT2O60909 372 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 ETHE1O95571 254 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 TGFB1P01137 390 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 ABOP16442 354 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 HMOX2P30519 316 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 ARRB2P32121 409 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 SERPINB5P36952 375 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 HTR6P50406 440 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 NEK2P51955 445 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 FOXA1P55317 472 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 OC90Q02509 493 aaPredicted RBP15.52■□□□□ 0.08
NEK9-211ENST00000557673 NSDHLQ15738 373 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 SFT2D3Q587I9 215 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 CES4AQ5XG92 561 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 FCRLBQ6BAA4 426 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 SPINK14Q6IE38 97 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 ABHD17CQ6PCB6 329 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 UBE3DQ7Z6J8 389 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 CRLF3Q8IUI8 442 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 NUDCD3Q8IVD9 361 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 LGI4Q8N135 537 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 MGARPQ8TDB4 240 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 PHF10Q8WUB8 498 aaKnown RBP15.52■□□□□ 0.08
NEK9-211ENST00000557673 QRFPRQ96P65 431 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 SIGLEC12Q96PQ1 595 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 LPAR4Q99677 370 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 SHCBP1LQ9BZQ2 653 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 PRM3Q9NNZ6 103 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 FARSBQ9NSD9 589 aaKnown RBP15.52■□□□□ 0.08
NEK9-211ENST00000557673 NKIRAS1Q9NYS0 192 aa15.52■□□□□ 0.08
NEK9-211ENST00000557673 AKAP9Q99996 3911 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 A0A088AWK7 358 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 WDR91A4D1P6 747 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 E9PLN8 166 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PRRG2O14669 202 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 SH3BGRLO75368 114 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 WISP2O76076 250 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 SEMA3DO95025 777 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 SCELO95171 688 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PDYNP01213 254 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 KRT6AP02538 564 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 KRT6BP04259 564 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 SERPINE1P05121 402 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 ZNF10P21506 573 aaPredicted RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 CERS1P27544 350 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 KRT6CP48668 564 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PLA2G16P53816 162 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 TGM3Q08188 693 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 GALNT1Q10472 559 aaPredicted RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 CUL3Q13618 768 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 CHI3L2Q15782 390 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 ARL13AQ5H913 290 aaPredicted RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 DEPDC1Q5TB30 811 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 HHATQ5VTY9 493 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PAPD4Q6PIY7 484 aaKnown RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 SPNS3Q6ZMD2 512 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PLPP5Q8NEB5 264 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 METTL6Q8TCB7 284 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 SELENOMQ8WWX9 145 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 FRMD6Q96NE9 622 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 KCNC2Q96PR1 638 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 HBEGFQ99075 208 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 VKORC1Q9BQB6 163 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 CENPKQ9BS16 269 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 ZNF717Q9BY31 904 aaPredicted RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 COPS7BQ9H9Q2 264 aaPredicted RBP15.51■□□□□ 0.07
NEK9-211ENST00000557673 BRF2Q9HAW0 419 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 MCCC2Q9HCC0 563 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 ANKRD10Q9NXR5 420 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 PSD3Q9NYI0 1048 aa15.51■□□□□ 0.07
NEK9-211ENST00000557673 NCOA6Q14686 2063 aaPredicted RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 GABRR3A8MPY1 467 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 C19orf84I3L1E1 186 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 SAP18O00422 153 aaKnown RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 RTCAO00442 366 aaKnown RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 PLPP1O14494 284 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 SP1P08047 785 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 RNH1P13489 461 aaKnown RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 HSD3B1P14060 373 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 BGNP21810 368 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 JAK1P23458 1154 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 PTX3P26022 381 aaPredicted RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 HSD3B2P26439 372 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 SSR2P43308 183 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 KIR3DL1P43629 444 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 RAP1GDS1P52306 607 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 ARFIP1P53367 373 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 MTTPP55157 894 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 BTN3A2P78410 334 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 BTG2P78543 158 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 CSTF3Q12996 717 aaKnown RBP15.5■□□□□ 0.07
NEK9-211ENST00000557673 SGO1Q5FBB7 561 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 KANK2Q63ZY3 851 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 SLC25A25Q6KCM7 469 aa15.5■□□□□ 0.07
NEK9-211ENST00000557673 ZNF793Q6ZN11 406 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms