RNA–Protein interactions for RNA: ENST00000557331.1

RDH11-210, Transcript of retinol dehydrogenase 11, humanhuman

TSL 4

Gene RDH11, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-210ENST00000557331 FAM13CQ8NE31 585 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 TNIP2Q8NFZ5 429 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 MBD3L2Q8NHZ7 208 aaPredicted RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 ZPLD1Q8TCW7 415 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 ZNF721Q8TF20 911 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 UCN3Q969E3 161 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 PTCD3Q96EY7 689 aaKnown RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 CERS2Q96G23 380 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 COX4I2Q96KJ9 171 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 ZNF597Q96LX8 424 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 DGAT2Q96PD7 388 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 TIMP4Q99727 224 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 TM9SF2Q99805 663 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 SFXN3Q9BWM7 321 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 PPANQ9NQ55 473 aaKnown RBP9.39□□□□□ -0.91
RDH11-210ENST00000557331 FETUBQ9UGM5 382 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 ADGRE2Q9UHX3 823 aa9.39□□□□□ -0.91
RDH11-210ENST00000557331 FREM3P0C091 2139 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 C4orf51C9J302 202 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 TMCC2O75069 709 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 TRAPPC6AO75865 159 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 WDR47O94967 919 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 SCELO95171 688 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 ACTL6AO96019 429 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 HRGP04196 525 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 ZNF37AP17032 561 aaPredicted RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 CHMP24386 653 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 GDF1P27539 372 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 CERS1P27544 350 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 GGT5P36269 586 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 SLC6A12P48065 614 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 HNRNPFP52597 415 aaKnown RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 ZNF136P52737 540 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 TERF1P54274 439 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 DIO3P55073 304 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 NRG3P56975 720 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 CRYZQ08257 329 aaKnown RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 TBCCQ15814 346 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 RBM20Q5T481 1227 aaKnown RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 TEDDM1Q5T9Z0 273 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 POMZP3Q6PJE2 187 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 CCDC137Q6PK04 289 aaKnown RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 ST13P4Q8IZP2 240 aaPredicted RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 ACOT4Q8N9L9 421 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 BBOF1Q8ND07 529 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 TMEM52Q8NDY8 209 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 TP53INP1Q96A56 240 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 RHBDF1Q96CC6 855 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 LRRC39Q96DD0 335 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 WDR34Q96EX3 536 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 KRT12Q99456 494 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 AICDAQ9GZX7 198 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 RBSNQ9H1K0 784 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 PIGMQ9H3S5 423 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 POPDC3Q9HBV1 291 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 SEMA4BQ9NPR2 832 aaPredicted RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 PRDM7Q9NQW5 492 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 SNX15Q9NRS6 342 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 NSMCE4AQ9NXX6 385 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 CTNNAL1Q9UBT7 734 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 PHF11Q9UIL8 331 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 CHCHD2Q9Y6H1 151 aaPredicted RBP9.38□□□□□ -0.91
RDH11-210ENST00000557331 MXRA5Q9NR99 2828 aa9.38□□□□□ -0.91
RDH11-210ENST00000557331 NBEAL1Q6ZS30 2694 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 A0A0G2JN53 185 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 GOLGA6L10A0A0M3HER8 536 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 CTAGE15A4D2H0 777 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 LRRC3CA6NJW4 275 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 EEF1E1-BLOC1S5C9J1V9 151 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 EEF1E1O43324 174 aaKnown RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 TRIM3O75382 744 aaPredicted RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 ETHE1O95571 254 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 LY6G6DO95868 133 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 RFPL3SP0C7P2 107 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 HIST1H1TP22492 207 aaPredicted RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 CPN2P22792 545 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 ATP5A1P25705 553 aaKnown RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 FNTAP49354 379 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 CDK9P50750 372 aaKnown RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 SNTB1Q13884 538 aaKnown RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 RPS6KA2Q15349 733 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 CYP1B1Q16678 543 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 SPRED3Q2MJR0 410 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 SULT1C3Q6IMI6 304 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 ADGRD1Q6QNK2 874 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 ENPP6Q6UWR7 440 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 CTAGE6Q86UF2 777 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 PDIK1LQ8N165 341 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 NAXEQ8NCW5 288 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 LRRN4CLQ8ND94 238 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 ZNF592Q92610 1267 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 DIO2Q92813 273 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 PBKQ96KB5 322 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 JSRP1Q96MG2 331 aaPredicted RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 UCN2Q96RP3 112 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 PHACTR1Q9C0D0 580 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 SLC6A15Q9H2J7 730 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 RPF2Q9H7B2 306 aaKnown RBP9.37□□□□□ -0.91
RDH11-210ENST00000557331 DNAJC11Q9NVH1 559 aa9.37□□□□□ -0.91
RDH11-210ENST00000557331 CAMK2AQ9UQM7 478 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms