RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 SPAG5Q96R06 1193 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 CBWD1Q9BRT8 395 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 SLC25A23Q9BV35 468 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 DNAI2Q9GZS0 605 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 UPF2Q9HAU5 1272 aaKnown RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 SEBOXQ9HB31 216 aaPredicted RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 SCPEP1Q9HB40 452 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 ZBTB20Q9HC78 741 aaPredicted RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 MRPL40Q9NQ50 206 aaKnown RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 TRMT1Q9NXH9 659 aaKnown RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 MARCH4Q9P2E8 410 aaPredicted RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 CNOT8Q9UFF9 292 aaKnown RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 ODF2LQ9ULJ1 636 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 ENTPD4Q9Y227 616 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 KIF3AQ9Y496 699 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 NME7Q9Y5B8 376 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 CSNK1G3Q9Y6M4 447 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 SESN1Q9Y6P5 492 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 TLN1Q9Y490 2541 aaKnown RBP3.52□□□□□ -1.85
CHD8-212ENST00000557329 CSMD2Q7Z408 3487 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 LRBAP50851 2863 aa3.52□□□□□ -1.85
CHD8-212ENST00000557329 SYNJ2BP-COX16A0A087WUM0 186 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SPTY2D1-AS1A0A0U1RR47 76 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 FAM237BA0A1B0GVD1 139 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 A0A1W2PPI3 338 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 FRMD3A2A2Y4 597 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 IGLON5A6NGN9 336 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ARGFXA6NJG6 315 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 LIPT2A6NK58 231 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 MYO1GB0I1T2 1018 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 NTN3O00634 580 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 RAD51BO15315 384 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 EIF3DO15371 548 aaKnown RBP eCLIP3.51□□□□□ -1.856e-7■■□□□ 13.8
CHD8-212ENST00000557329 SLC7A4O43246 635 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZW10O43264 779 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 TGFB1I1O43294 461 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 STX6O43752 255 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 PRKNO60260 465 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 JAK2O60674 1132 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZG16O60844 167 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 LRCH4O75427 683 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 MLYCDO95822 493 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SRPRAP08240 638 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 ALPIP09923 528 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 P4HA1P13674 534 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 PDGFRAP16234 1089 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 HNRNPH3P31942 346 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 CASP14P31944 242 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ARCN1P48444 511 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 DRG2P55039 364 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 NAP1L1P55209 391 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 RPS24P62847 133 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 RPS21P63220 83 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 MPP1Q00013 466 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 KIR2DS3Q14952 304 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 DLG2Q15700 870 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZNF699Q32M78 642 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZDHHC20Q5W0Z9 365 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 CYP20A1Q6UW02 462 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 MEX3BQ6ZN04 569 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZNF720Q7Z2F6 126 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SCD5Q86SK9 330 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 VPS36Q86VN1 386 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 CBWD2Q8IUF1 395 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SLC5A8Q8N695 610 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ZNF557Q8N988 423 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 C1orf131Q8NDD1 294 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 SLC24A4Q8NFF2 622 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 OR6C4Q8NGE1 309 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 FIBINQ8TAL6 211 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 HM13Q8TCT9 377 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SLC38A5Q8WUX1 472 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SYAP1Q96A49 352 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 LINGO1Q96FE5 620 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ST6GAL2Q96JF0 529 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SLC45A3Q96JT2 553 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 CCDC114Q96M63 670 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 LRRC61Q9BV99 259 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 BARHL1Q9BZE3 327 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 CSTL1Q9H114 145 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 LRRC4Q9HBW1 653 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 SDF2L1Q9HCN8 221 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 ASF1BQ9NVP2 202 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 COX16Q9P0S2 106 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 MDFICQ9P1T7 246 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 RCOR3Q9P2K3 495 aaPredicted RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 NENFQ9UMX5 172 aa3.51□□□□□ -1.85
CHD8-212ENST00000557329 TNRC6AQ8NDV7 1962 aaKnown RBP3.51□□□□□ -1.85
CHD8-212ENST00000557329 ADGRG4Q8IZF6 3080 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 UNC13CQ8NB66 2214 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 A0A087WYN8 130 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 HEATR9A2RTY3 570 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 ZSCAN5CA6NGD5 496 aaPredicted RBP3.5□□□□□ -1.85
CHD8-212ENST00000557329 LMO7DNF2Z398 122 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 HS6ST1O60243 411 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 PFKFB2O60825 505 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CTDNEP1O95476 244 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 CPNE6O95741 557 aa3.5□□□□□ -1.85
CHD8-212ENST00000557329 PLGP00747 810 aaPredicted RBP3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms