RNA–Protein interactions for RNA: ENST00000557302.1

SHMT2-228, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-228ENST00000557302 CCL27Q9Y4X3 112 aa12.69□□□□□ -0.38
SHMT2-228ENST00000557302 HEMK1Q9Y5R4 338 aaPredicted RBP12.69□□□□□ -0.38
SHMT2-228ENST00000557302 DOCK10Q96BY6 2186 aa12.69□□□□□ -0.38
SHMT2-228ENST00000557302 CNTRLQ7Z7A1 2325 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 UQCRHLA0A096LP55 91 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 TRBV11-1A0A0K0K1C0 115 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 HMGB1P1B2RPK0 211 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 DYRK3O43781 588 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 DRD2P14416 443 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 GSTM5P46439 218 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ALDH9A1P49189 494 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 CLCN2P51788 898 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ZNF763Q0D2J5 394 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 C19orf57Q0VDD7 668 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 BST1Q10588 318 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ABHD17BQ5VST6 288 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 B3GNTL1Q67FW5 361 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 H3F3CQ6NXT2 135 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 SLC48A1Q6P1K1 146 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 IGFL2Q6UWQ7 119 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 Q6ZSR9 355 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 TRIM42Q8IWZ5 723 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 KIRREL3Q8IZU9 778 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 MMP21Q8N119 569 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 KIF2BQ8N4N8 673 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 SLC5A8Q8N695 610 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ZNF781Q8N8C0 355 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 APCDD1LQ8NCL9 501 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 MORN4Q8NDC4 146 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 OR4K14Q8NGD5 310 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 OR2T11Q8NH01 316 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 C16orf78Q8WTQ4 265 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 NCLNQ969V3 563 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 PPWD1Q96BP3 646 aaKnown RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ZNF354BQ96LW1 612 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 CCT7Q99832 543 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 OR8D2Q9GZM6 311 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ZNF395Q9H8N7 513 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ZBTB20Q9HC78 741 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 ANAPC2Q9UJX6 822 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 PSME2Q9UL46 239 aa12.68□□□□□ -0.38
SHMT2-228ENST00000557302 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 POLR3HQ9Y535 204 aaPredicted RBP12.68□□□□□ -0.38
SHMT2-228ENST00000557302 B8ZZF3 427 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 SKAP2O75563 359 aaPredicted RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 SASH3O75995 380 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 SLC35E2P0CK97 266 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 CD97P48960 835 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 RPL14P50914 215 aaKnown RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 GPR143P51810 404 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 XKP51811 444 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 RPL38P63173 70 aaKnown RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 ARG2P78540 354 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 HEPACAMQ14CZ8 416 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 MEP1AQ16819 746 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 NADK2Q4G0N4 442 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 XKR7Q5GH72 579 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 ACER2Q5QJU3 275 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 ATG16L1Q676U5 607 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 FCRLBQ6BAA4 426 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 NOXRED1Q6NXP6 359 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 LGI4Q8N135 537 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 RBMXL3Q8N7X1 1067 aaKnown RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 CDC26Q8NHZ8 85 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 RAB3IL1Q8TBN0 382 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 SLC2A12Q8TD20 617 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 KLHL29Q96CT2 875 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 SORT1Q99523 831 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 MFRPQ9BY79 579 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 DEFB126Q9BYW3 111 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 C20orf27Q9GZN8 174 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 STMN3Q9NZ72 180 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 HEY2Q9UBP5 337 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 CES1P1Q9UKY3 287 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 WBP11Q9Y2W2 641 aaKnown RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 TMED5Q9Y3A6 229 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
SHMT2-228ENST00000557302 BSNQ9UPA5 3926 aa12.67□□□□□ -0.38
SHMT2-228ENST00000557302 ZNF462Q96JM2 2506 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 DYTNA2CJ06 578 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 LSM1O15116 133 aaKnown RBP12.66□□□□□ -0.38
SHMT2-228ENST00000557302 ERAL1O75616 437 aaKnown RBP12.66□□□□□ -0.38
SHMT2-228ENST00000557302 DDAH2O95865 285 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 CPMP14384 443 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 GALNSP34059 522 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 KIAA0040Q15053 153 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 GALNTL6Q49A17 601 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 ATP6AP1LQ52LC2 224 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 DGAT2L6Q6ZPD8 337 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 IKBIPQ70UQ0 350 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 RPS19BP1Q86WX3 136 aaKnown RBP12.66□□□□□ -0.38
SHMT2-228ENST00000557302 CRLF3Q8IUI8 442 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 OR1N1Q8NGS0 311 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 RIT1Q92963 219 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 PNPLA2Q96AD5 504 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 C19orf60Q96EN9 201 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 ART5Q96L15 291 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 FCRL1Q96LA6 429 aa12.66□□□□□ -0.38
SHMT2-228ENST00000557302 PPP3R2Q96LZ3 170 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms