RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, human

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HIF1A-210	ENST00000557206	EMC2	Q15006	297 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	P2RY14	Q15391	338 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	ZNF239	Q16600	458 aa	Known RBP	4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	C15orf32	Q32M92	178 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	MPPE1	Q53F39	396 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	ZNF506	Q5JVG8	444 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	LEMD1	Q68G75	181 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	REP15	Q6BDI9	236 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	RTL6	Q6ICC9	239 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	ARMCX5	Q6P1M9	558 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	STH	Q8IWL8	128 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	OR4L1	Q8NH43	312 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	FAM213A	Q9BRX8	229 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	MRPL9	Q9BYD2	267 aa	Known RBP	4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	SLC26A1	Q9H2B4	701 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	GAN	Q9H2C0	597 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	COMMD8	Q9NX08	183 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	TSPAN16	Q9UKR8	245 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	SPATA2	Q9UM82	520 aa		4.01	□□□□□ -1.77
HIF1A-210	ENST00000557206	YJEFN3	A6XGL0	299 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206		E9PAM4	449 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	PHF1	O43189	567 aa	Predicted RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	FRAT2	O75474	233 aa	Predicted RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	PRDM1	O75626	825 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	HSD17B1	P14061	328 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	RPL34	P49207	117 aa	Known RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	ARF5	P84085	180 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	CDKL1	Q00532	357 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	PEX6	Q13608	980 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	C2orf76	Q3KRA6	126 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	EIPR1	Q53HC9	387 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	SLC25A30	Q5SVS4	291 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	SPINK14	Q6IE38	97 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	REG3G	Q6UW15	175 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	B3GLCT	Q6Y288	498 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	CEACAM19	Q7Z692	300 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	WDR49	Q8IV35	697 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	RTL3	Q8N8U3	475 aa	Known RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	MSANTD4	Q8NCY6	345 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	OR1K1	Q8NGR3	316 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	KIAA1524	Q8TCG1	905 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	FBXO25	Q8TCJ0	367 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	GLYATL1	Q969I3	302 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	FUNDC2	Q9BWH2	189 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	DCLRE1B	Q9H816	532 aa		4	□□□□□ -1.77
HIF1A-210	ENST00000557206	DDX28	Q9NUL7	540 aa	Known RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	TECR	Q9NZ01	308 aa	Known RBP	4	□□□□□ -1.77
HIF1A-210	ENST00000557206	C5orf51	A6NDU8	294 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	RNF212B	A8MTL3	300 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	GOSR1	O95249	250 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	HMOX1	P09601	288 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	GP9	P14770	177 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	ZNF18	P17022	549 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	MATK	P42679	507 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	MTIF2	P46199	727 aa	Known RBP	3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	PRELP	P51888	382 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	ADAR	P55265	1226 aa	Known RBP	3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	UCP2	P55851	309 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	GALK2	Q01415	458 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	NPRL3	Q12980	569 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	GK2	Q14410	553 aa	Predicted RBP	3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	CNPY1	Q3B7I2	92 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	CCDC184	Q52MB2	194 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	VWA2	Q5GFL6	755 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	CCDC71	Q8IV32	467 aa	Predicted RBP	3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	PARP8	Q8N3A8	854 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	SUMF1	Q8NBK3	374 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	SPC24	Q8NBT2	197 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	ZNRF1	Q8ND25	227 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	OR4A16	Q8NH70	328 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	RPGRIP1	Q96KN7	1286 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	ABCG4	Q9H172	646 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	CXXC4	Q9H2H0	198 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	ACOXL	Q9NUZ1	547 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	GPR83	Q9NYM4	423 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	MTRR	Q9UBK8	725 aa		3.99	□□□□□ -1.77
HIF1A-210	ENST00000557206	MEI4	A8MW99	385 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	SRRM5	B3KS81	715 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	SLC28A1	O00337	649 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	EEF2K	O00418	725 aa	Known RBP	3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	TXNDC12	O95881	172 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	REN	P00797	406 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	PDGFB	P01127	241 aa	Predicted RBP	3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	FCGR3A	P08637	254 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	UGT1A6	P19224	532 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	ELK3	P41970	407 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	NSF	P46459	744 aa	Known RBP	3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	BRCC3	P46736	316 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	LIMK2	P53671	638 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	SLC12A3	P55017	1021 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	TRA2B	P62995	288 aa	Known RBP	3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	HERV-K104	P63124	156 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	C17orf67	Q0P5P2	114 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	PDE7A	Q13946	482 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	CYLC2	Q14093	348 aa	Predicted RBP	3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	CRMP1	Q14194	572 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	NHLRC3	Q5JS37	347 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	ABRAXAS1	Q6UWZ7	409 aa		3.98	□□□□□ -1.77
HIF1A-210	ENST00000557206	RAPH1	Q70E73	1250 aa		3.98	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms