RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 OR5M9Q8NGP3 310 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 LILRB4Q8NHJ6 448 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 SLC22A8Q8TCC7 542 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 CHTF18Q8WVB6 975 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 GPR78Q96P69 363 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 CNPPD1Q9BV87 410 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 VPS11Q9H270 941 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 ZDHHC18Q9NUE0 388 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 RNF11Q9Y3C5 154 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 ASB4Q9Y574 426 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 TNPO3Q9Y5L0 923 aaKnown RBP20.88■□□□□ 0.93
ACTN1-220ENST00000556433 LIPGQ9Y5X9 500 aa20.88■□□□□ 0.93
ACTN1-220ENST00000556433 IQANK1A0A1B0GTG1 560 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ATP6AP2A0A1C7CYW4 349 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 WASHC1A8K0Z3 465 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 UGDHO60701 494 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 EEDO75530 441 aaKnown RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ATP6AP2O75787 350 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SIX3O95343 332 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 GPR75O95800 540 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 CHRNB4P30926 498 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 PHBP35232 272 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 BSGP35613 385 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SERPINB8P50452 374 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 NEK2P51955 445 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 CKAP4Q07065 602 aaKnown RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 FOXO1Q12778 655 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 CUL3Q13618 768 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ZNF267Q14586 743 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ZNF791Q3KP31 576 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SLC22A10Q63ZE4 541 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 CYP20A1Q6UW02 462 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ST13P4Q8IZP2 240 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ACBD4Q8NC06 268 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 OR5M3Q8NGP4 307 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 C14orf79Q96F83 325 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 FBXL20Q96IG2 436 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SMC6Q96SB8 1091 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 ZNF717Q9BY31 904 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 UCK2Q9BZX2 261 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 DDX31Q9H8H2 851 aaKnown RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SEMA4BQ9NPR2 832 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 PNPLA3Q9NST1 481 aa20.87■□□□□ 0.93
ACTN1-220ENST00000556433 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.87■□□□□ 0.931e-7■□□□□ 10.1
ACTN1-220ENST00000556433 LYARQ9NX58 379 aaKnown RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 TUBA8Q9NY65 449 aaPredicted RBP20.87■□□□□ 0.93
ACTN1-220ENST00000556433 A0A1W2PR48 441 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 OR14I1A6ND48 311 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 GLOD5A6NK44 160 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 BCKDKO14874 412 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 TMPRSS11DO60235 418 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 OR10H2O60403 315 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 IGHG3P01860 377 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ALDOAP04075 364 aaKnown RBP20.86■□□□□ 0.93
ACTN1-220ENST00000556433 FAM58BPP0C7Q3 252 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 PIGAP37287 484 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 PIK3CGP48736 1102 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 NUP107P57740 925 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 HERVK_113P63132 956 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ERVK-8P63133 956 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 SLC10A1Q14973 349 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 HYAL4Q2M3T9 481 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 MRM1Q6IN84 353 aaKnown RBP20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ZNF585AQ6P3V2 769 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ACAD11Q709F0 780 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 TRILQ7L0X0 811 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 CCDC71Q8IV32 467 aaPredicted RBP20.86■□□□□ 0.93
ACTN1-220ENST00000556433 SLC15A4Q8N697 577 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 L3MBTL4Q8NA19 623 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ATP6V1E2Q96A05 226 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 PELOQ9BRX2 385 aaKnown RBP20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ERVK-6Q9BXR3 956 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 WDR41Q9HAD4 459 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 PSD3Q9NYI0 1048 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 NINJ2Q9NZG7 142 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 ERVK-19Q9WJR5 959 aa20.86■□□□□ 0.93
ACTN1-220ENST00000556433 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.86■□□□□ 0.93
ACTN1-220ENST00000556433 EML6Q6ZMW3 1958 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 A0A0A6YYD5 115 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 A0A1B0GVC2 190 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 NKX2-6A6NCS4 301 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 FAM90A27PA6NNH2 459 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 FOXE1O00358 373 aaPredicted RBP20.85■□□□□ 0.93
ACTN1-220ENST00000556433 CLDN9O95484 217 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 NADKO95544 446 aaPredicted RBP20.85■□□□□ 0.93
ACTN1-220ENST00000556433 CELA3AP09093 270 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 ARL1P40616 181 aaPredicted RBP20.85■□□□□ 0.93
ACTN1-220ENST00000556433 KRTAP10-9P60411 292 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 TLE4Q04727 773 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 METTL2BQ6P1Q9 378 aaKnown RBP20.85■□□□□ 0.93
ACTN1-220ENST00000556433 LYPD8Q6UX82 237 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 RNF111Q6ZNA4 994 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 SLC29A4Q7RTT9 530 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 PLD6Q8N2A8 252 aaKnown RBP20.85■□□□□ 0.93
ACTN1-220ENST00000556433 WDR20Q8TBZ3 569 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 RIT1Q92963 219 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 GAL3ST4Q96RP7 486 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 ACSS3Q9H6R3 686 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 LDAHQ9H6V9 325 aa20.85■□□□□ 0.93
ACTN1-220ENST00000556433 NOL11Q9H8H0 719 aaKnown RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms