RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 LINC00299Q6ZSB3 139 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 PRAP1Q96NZ9 151 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 FUZQ9BT04 418 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CENPOQ9BU64 300 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CNOT2Q9NZN8 540 aaKnown RBP14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLCO3A1Q9UIG8 710 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 GNB5O14775 395 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 FHP07954 510 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 TYRP14679 529 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 AAK1Q2M2I8 961 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 AKIRIN2Q53H80 203 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 ATAD3CQ5T2N8 411 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 SHFQ7M4L6 423 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 TRIM46Q7Z4K8 759 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 DCUN1D3Q8IWE4 304 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 RIMKLAQ8IXN7 391 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR4K5Q8NGD3 323 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 LCN9Q8WX39 176 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 CD180Q99467 661 aa14.36□□□□□ -0.11
ARHGEF40-207ENST00000556399 C2orf92A0A1B0GVN3 265 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 HMX3A6NHT5 357 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANKRD28O15084 1053 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ARL6IP5O75915 188 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 RCBTB2O95199 551 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 PTHP01270 115 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ACP5P13686 325 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ARF5P84085 180 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF267Q14586 743 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC46A3Q7Z3Q1 461 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 PIAS4Q8N2W9 510 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 POMGNT2Q8NAT1 580 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 MOSPD2Q8NHP6 518 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ELOVL2Q9NXB9 296 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 NDOR1Q9UHB4 597 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 A0A1B0GTL3 188 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 TNFRSF10BO14763 440 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 PTPN2P17706 415 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 MTNR1AP48039 350 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF551Q7Z340 670 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 SAMD14Q8IZD0 417 aaPredicted RBP14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 CELF2-AS1Q8N7Q2 184 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 GRHL3Q8TE85 626 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 CREB3L1Q96BA8 519 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 HRASLS5Q96KN8 279 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 IL17FQ96PD4 163 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 F2RL3Q96RI0 385 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 MCHR1Q99705 422 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 BRF2Q9HAW0 419 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 GPR52Q9Y2T5 361 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 TMEM98Q9Y2Y6 226 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 COLEC10Q9Y6Z7 277 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 PCDH17O14917 1159 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 MT-ND5P03915 603 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANXA3P12429 323 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 UGT2B10P36537 528 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 SLC35A2P78381 396 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 RHAGQ02094 409 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 KLBQ86Z14 1044 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 TSEN15Q8WW01 171 aaKnown RBP14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ABCA3Q99758 1704 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 SIAEQ9HAT2 523 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ZNF69Q9UC07 566 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 ADAMTSL1Q8N6G6 1762 aa14.35□□□□□ -0.11
ARHGEF40-207ENST00000556399 OR2A25A4D2G3 310 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 METTL15A6NJ78 407 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANXA2P2A6NMY6 339 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 PROM1O43490 865 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 ANXA2P07355 339 aaKnown RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 HOXD8P13378 290 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 DDX6P26196 483 aaKnown RBP eCLIP14.34□□□□□ -0.117e-9■□□□□ 11.2
ARHGEF40-207ENST00000556399 CD70P32970 193 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 ACVR1Q04771 509 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 AQP6Q13520 282 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 LRRC32Q14392 662 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 SNAP47Q5SQN1 464 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 KDM4DQ6B0I6 523 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 FRMPD2BQ6IN97 320 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 NXPE4Q6UWF7 544 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 LRRTM4Q86VH4 590 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 KCNK12Q9HB15 430 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 NLGN3Q9NZ94 848 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 ASB1Q9Y576 335 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3DA0A087WVF3 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3IA0A087WXS9 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3EA0A087X179 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3KA0A087X1G2 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3FA6NER0 549 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3LB9A6J9 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 LYRM1O43325 122 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3HP0C7X1 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 HK1P19367 917 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 RAB8AP61006 207 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 CATSPEREQ5SY80 951 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3GQ6DHY5 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3CQ6IPX1 549 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 CCDC36Q8IYA8 594 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 TBC1D3Q8IZP1 549 aaPredicted RBP14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 NR4A3Q92570 626 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 MED11Q9P086 117 aa14.34□□□□□ -0.11
ARHGEF40-207ENST00000556399 STON1Q9Y6Q2 735 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms