RNA–Protein interactions for RNA: ENST00000556375.5

SLIRP-206, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-206ENST00000556375 LRFN1Q9P244 771 aa10.73□□□□□ -0.69
SLIRP-206ENST00000556375 VPS29Q9UBQ0 182 aa10.73□□□□□ -0.69
SLIRP-206ENST00000556375 COPS7AQ9UBW8 275 aa10.73□□□□□ -0.69
SLIRP-206ENST00000556375 PLLPQ9Y342 182 aa10.73□□□□□ -0.69
SLIRP-206ENST00000556375 COL12A1Q99715 3063 aa10.73□□□□□ -0.69
SLIRP-206ENST00000556375 USP9YO00507 2555 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SERTM1A2A2V5 107 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ANKUB1A6NFN9 424 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 PRKNO60260 465 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 OR10H2O60403 315 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ITGA10O75578 1167 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SLC25A12O75746 678 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 RASAL1O95294 804 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 CBX6O95503 412 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 IGKV3-11P04433 115 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 EDN3P14138 238 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 CD46P15529 392 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 GALNSP34059 522 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 CYB561P49447 251 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ST13P50502 369 aaKnown RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 HLCSP50747 726 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SPRED3Q2MJR0 410 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SPIN4Q56A73 249 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ZNF468Q5VIY5 522 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ZNF324BQ6AW86 544 aaPredicted RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 FAM26EQ8N5C1 309 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ZNF321PQ8N8H1 164 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 DNAJB8Q8NHS0 232 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 ZNF721Q8TF20 911 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 NR4A3Q92570 626 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 FBXL20Q96IG2 436 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SENP1Q9P0U3 644 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 YARS2Q9Y2Z4 477 aaKnown RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 TIMM22Q9Y584 194 aa10.72□□□□□ -0.69
SLIRP-206ENST00000556375 SPTBN1Q01082 2364 aaKnown RBP10.72□□□□□ -0.69
SLIRP-206ENST00000556375 C1orf226A1L170 272 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TMEM200CA6NKL6 621 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 PGRMC2O15173 223 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 NME2P1O60361 137 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CRCPO75575 148 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CRYABP02511 175 aaKnown RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SLC35E2P0CK97 266 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CHN1P15882 459 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 NME2P22392 152 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 PIK3R1P27986 724 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SSR4P51571 173 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TDGF1P3P51864 188 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 HK2P52789 917 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 FOXA1P55317 472 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TRA2BP62995 288 aaKnown RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 RNF4P78317 190 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 ZNF844Q08AG5 666 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 ACSM2AQ08AH3 577 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 ASPHQ12797 758 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 ELOAQ14241 798 aaKnown RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 KRT71Q3SY84 523 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 DOPEY1Q5JWR5 2465 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 ACSM2BQ68CK6 577 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SPINK14Q6IE38 97 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 DGAT2L6Q6ZPD8 337 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 C10orf107Q8IVU9 208 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 GPALPP1Q8IXQ4 340 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CYP4Z2PQ8N1L4 340 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TMEM156Q8N614 296 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 OR5L2Q8NGL0 311 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 NUBPLQ8TB37 319 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CHTF18Q8WVB6 975 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TMEM125Q96AQ2 219 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 PPWD1Q96BP3 646 aaKnown RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SENP5Q96HI0 755 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 FAM111AQ96PZ2 611 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SMC6Q96SB8 1091 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 TRMOQ9BU70 441 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 FAIM2Q9BWQ8 316 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 GATA5Q9BWX5 397 aaPredicted RBP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 HES7Q9BYE0 225 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 KLHL1Q9NR64 748 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.71□□□□□ -0.69
SLIRP-206ENST00000556375 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 MCM8Q9UJA3 840 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 PCDHA9Q9Y5H5 950 aa10.71□□□□□ -0.69
SLIRP-206ENST00000556375 CROCCQ5TZA2 2017 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 ASPDHA6ND91 283 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 WASHC1A8K0Z3 465 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 PCDH7O60245 1069 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 TRIM13O60858 407 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 SPAG7O75391 227 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 OR2J2O76002 312 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 SP1P08047 785 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 UROSP10746 265 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 TIA1P31483 386 aaKnown RBP eCLIP10.7□□□□□ -0.7
SLIRP-206ENST00000556375 ERVK-8P63133 956 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 PMP22Q01453 160 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 HMGCS1Q01581 520 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 SRSF1Q07955 248 aaKnown RBP eCLIP10.7□□□□□ -0.7
SLIRP-206ENST00000556375 UBAP2LQ14157 1087 aaKnown RBP10.7□□□□□ -0.7
SLIRP-206ENST00000556375 FHL5Q5TD97 284 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 SLC25A25Q6KCM7 469 aa10.7□□□□□ -0.7
SLIRP-206ENST00000556375 SLC48A1Q6P1K1 146 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms