RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 A0A1W2PQ67 120 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 FUOMA2VDF0 154 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SAGE2PA6NJ88 616 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PTGES3LE9PB15 166 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 BOLA2-SMG1P6H3BVE0 249 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 J3QRK9 145 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MASP2O00187 686 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 QSOX1O00391 747 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MANBAO00462 879 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 OR7A17O14581 309 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 AREL1O15033 823 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 KPNA5O15131 536 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 OR1I1O60431 355 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TSPAN3O60637 253 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TBL1XO60907 577 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 STK16O75716 305 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SLC25A14O95258 325 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PGLSO95336 258 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SEC24AO95486 1093 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 NADKO95544 446 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TSPAN12O95859 305 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 FADS2O95864 444 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TBX18O95935 607 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 APOA1P02647 267 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 C9P02748 559 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ALDH2P05091 517 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CKBP12277 381 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 COX7A2P14406 83 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 BPIP17213 487 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CTPS1P17812 591 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DDX5P17844 614 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MATN1P21941 496 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PSMA3P25788 255 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 IL12AP29459 219 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PRDX3P30048 256 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 S100A5P33763 92 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RYKP34925 604 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SOX6P35712 828 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 KRT20P35900 424 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RPL3P39023 403 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DCTP40126 519 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 HALP42357 657 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 NSG1P42857 185 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MAPK9P45984 424 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PPP3CCP48454 512 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CLK3P49761 638 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PGFP49763 221 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 HNMTP50135 292 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CCR3P51677 355 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 HNRNPFP52597 415 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 HK3P52790 923 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PNLIPRP1P54315 467 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DEFA1P59665 94 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DEFA3P59666 94 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RPS24P62847 133 aaKnown RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TIAL1Q01085 375 aaKnown RBP eCLIP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RELAQ04206 551 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF33BQ06732 778 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CD47Q08722 323 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PLD1Q13393 1074 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SELPLGQ14242 412 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PTGR1Q14914 329 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ABRAXAS2Q15018 415 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PON2Q15165 354 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 INAQ16352 499 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CSRP2Q16527 193 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MEP1AQ16819 746 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MST1LQ2TV78 715 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SPDYE7PQ495Y7 208 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RUNDC3AQ59EK9 446 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 OR2T5Q6IEZ7 315 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SBSNQ6UWP8 590 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ENPP6Q6UWR7 440 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CD300LGQ6UXG3 332 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DLEU7Q6UYE1 221 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MACC1Q6ZN28 852 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 DCDC5Q6ZRR9 648 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 FAM43BQ6ZT52 329 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TPGS1Q6ZTW0 290 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CHST15Q7LFX5 561 aaPredicted RBP4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SERPINA11Q86U17 422 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 IGFN1Q86VF2 1251 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TRIM69Q86WT6 500 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF280BQ86YH2 543 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SLC15A4Q8N697 577 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ZNF540Q8NDQ6 660 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 OR2T29Q8NH02 315 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 SLC22A17Q8WUG5 538 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 GTF2H4Q92759 462 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 MYDGFQ969H8 173 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 ESAMQ96AP7 390 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 FBXL8Q96CD0 374 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CMTM7Q96FZ5 175 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 CEP19Q96LK0 163 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TEX37Q96LM6 180 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 PANX1Q96RD7 426 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 HBEGFQ99075 208 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 COPS8Q99627 209 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 RAD9AQ99638 391 aa4.21□□□□□ -1.74
ATXN3-241ENST00000556374 TMEM175Q9BSA9 504 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms