RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 EXT1Q16394 746 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 DPY19L1Q2PZI1 675 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 LSM12Q3MHD2 195 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 SFT2D3Q587I9 215 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CPTPQ5TA50 214 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 INO80CQ6PI98 192 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 KIRREL2Q6UWL6 708 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 NDUFAF7Q7L592 441 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PPP1R32Q7Z5V6 425 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ANKRD37Q7Z713 158 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TMEM151BQ8IW70 566 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ST13P4Q8IZP2 240 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 MIER2Q8N344 545 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CLEC1AQ8NC01 280 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 GLB1L3Q8NCI6 653 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 VPS37AQ8NEZ2 397 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 OR14A16Q8NHC5 309 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CLHC1Q8NHS4 586 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ZFP28Q8NHY6 868 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.16□□□□□ -1.26
TDP1-214ENST00000556063 DNAJB14Q8TBM8 379 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TSLPQ969D9 159 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 EXOSC8Q96B26 276 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 ANKRD9Q96BM1 317 aaPredicted RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 THOC1Q96FV9 657 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 ART5Q96L15 291 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 OR52B2Q96RD2 323 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TUBB6Q9BUF5 446 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 FAM107BQ9H098 131 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ATP13A2Q9NQ11 1180 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 NECTIN3Q9NQS3 549 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 PNO1Q9NRX1 252 aaKnown RBP7.16□□□□□ -1.26
TDP1-214ENST00000556063 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.16□□□□□ -1.26
TDP1-214ENST00000556063 AIG1Q9NVV5 245 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 TMEM45AQ9NWC5 275 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 P4HTMQ9NXG6 502 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 HEY2Q9UBP5 337 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 BAIAP2L1Q9UHR4 511 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 ATP6V1HQ9UI12 483 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 MAN2B2Q9Y2E5 1009 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 HS3ST3B1Q9Y662 390 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CLCA3PQ9Y6N3 262 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 CACNA1BQ00975 2339 aa7.16□□□□□ -1.26
TDP1-214ENST00000556063 DOCK10Q96BY6 2186 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 CACNA1GO43497 2377 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 OR2W5A6NFC9 320 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 E9PBE3 544 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SOCS6O14544 535 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SCAMP2O15127 329 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 PDPK1O15530 556 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 PRKRAO75569 313 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 SLC22A3O75751 556 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SLITRK5O94991 958 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 NCF2P19878 526 aaPredicted RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 NT5EP21589 574 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ITPKBP27987 946 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 S100A3P33764 101 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ATP4BP51164 291 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SEC24CP53992 1094 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 FOXL2P58012 376 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 IGLV3-21P80748 117 aaPredicted RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 ID2Q02363 134 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 EEF1A2Q05639 463 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 LRRC74AQ0VAA2 488 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 AIMP2Q13155 320 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 SRSF6Q13247 344 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 ATP1A4Q13733 1029 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 PDE7AQ13946 482 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SQLEQ14534 574 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 PTGR1Q14914 329 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 PDCD4Q53EL6 469 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 FAM69BQ5VUD6 431 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 PAPD4Q6PIY7 484 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 RIPOR1Q6ZS17 1223 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 LANCL3Q6ZV70 420 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SPATA21Q7Z572 469 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 OR4N5Q8IXE1 308 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 LRRC25Q8N386 305 aaPredicted RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 MORN4Q8NDC4 146 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 TMEM52Q8NDY8 209 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 OR11G2Q8NGC1 345 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 RFWD2Q8NHY2 731 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ADAMTS17Q8TE56 1095 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 APOBEC4Q8WW27 367 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 RIT1Q92963 219 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 GFM2Q969S9 779 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 TESCQ96BS2 214 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 C8orf44Q96CB5 159 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ZBED6CLQ96FA7 236 aaPredicted RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 EGLN2Q96KS0 407 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ELAC2Q9BQ52 826 aaKnown RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 EBF4Q9BQW3 602 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 TMEM120AQ9BXJ8 343 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 BRINP2Q9C0B6 783 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 ZNF700Q9H0M5 742 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 EPN3Q9H201 632 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 SDR39U1Q9NRG7 319 aaPredicted RBP7.15□□□□□ -1.26
TDP1-214ENST00000556063 ZIM2Q9NZV7 527 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 COPS7AQ9UBW8 275 aa7.15□□□□□ -1.26
TDP1-214ENST00000556063 FBXL4Q9UKA2 621 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms