RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 RTL4Q6ZR62 310 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 NUDT13Q86X67 352 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 DOLPP1Q86YN1 238 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 ST13P4Q8IZP2 240 aaPredicted RBP12.79□□□□□ -0.36
PCNX4-209ENST00000555569 EID3Q8N140 333 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 GOLM1Q8NBJ4 401 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 OR2M7Q8NG81 312 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 KIF18AQ8NI77 898 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 NUBPLQ8TB37 319 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 MTFMTQ96DP5 389 aaKnown RBP12.79□□□□□ -0.36
PCNX4-209ENST00000555569 FBXL20Q96IG2 436 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 SGCZQ96LD1 299 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 NSUN5Q96P11 429 aaKnown RBP12.79□□□□□ -0.36
PCNX4-209ENST00000555569 PHF12Q96QT6 1004 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 FRG2BQ96QU4 278 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 MRPL57Q9BQC6 102 aaKnown RBP12.79□□□□□ -0.36
PCNX4-209ENST00000555569 MRPL46Q9H2W6 279 aaKnown RBP12.79□□□□□ -0.36
PCNX4-209ENST00000555569 WDR41Q9HAD4 459 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 ZBTB26Q9HCK0 441 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 NINQ8N4C6 2090 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 MYO9AB2RTY4 2548 aa12.79□□□□□ -0.36
PCNX4-209ENST00000555569 ABCA12Q86UK0 2595 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 A0A0G2JMM0 328 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 EXOC1LA0A1B0GW35 172 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 A0A1W2PPB8 328 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 A0A1W2PR48 441 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 A0A1W2PRS3 328 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 GLOD5A6NK44 160 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 KIR3DP1A8MWS1 328 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 E9PLN8 166 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 HRKO00198 91 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 OR10H2O60403 315 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 ZNF354AO60765 605 aaPredicted RBP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 AIFM1O95831 613 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 RPS17P08708 135 aaKnown RBP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 ABHD2P08910 425 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 CNR1P21554 472 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 IFT88Q13099 833 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 TRAF3Q13114 568 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 ZNF630Q2M218 657 aaPredicted RBP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 MPEG1Q2M385 716 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 GGTA1PQ4G0N0 100 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 PIGGQ5H8A4 983 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 C10orf62Q5T681 223 aaPredicted RBP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 GK5Q6ZS86 529 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 MILR1Q7Z6M3 343 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 TICAM1Q8IUC6 712 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 C9orf40Q8IXQ3 194 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 OR52N2Q8NGI0 321 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 SLC22A8Q8TCC7 542 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 DOK4Q8TEW6 326 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 PHF10Q8WUB8 498 aaKnown RBP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 VKORC1Q9BQB6 163 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 CNPPD1Q9BV87 410 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 CHST11Q9NPF2 352 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.78□□□□□ -0.36
PCNX4-209ENST00000555569 NFU1Q9UMS0 254 aa12.78□□□□□ -0.36
PCNX4-209ENST00000555569 IQANK1A0A1B0GTG1 560 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 WASHC1A8K0Z3 465 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 FAM166BA8MTA8 275 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 G3V3Y1 287 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ACOT7O00154 380 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 GBAP04062 536 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 TPOP07202 933 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 GALNSP34059 522 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 PPIAP62937 165 aaKnown RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 HERVK_113P63132 956 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ERVK-8P63133 956 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ASPHQ12797 758 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ZNF267Q14586 743 aaPredicted RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 SPRED3Q2MJR0 410 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 LGSNQ5TDP6 509 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 OR52E8Q6IFG1 317 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 C3P1Q6ZMU1 363 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 RNF111Q6ZNA4 994 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 RGS9BPQ6ZS82 235 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 NCCRP1Q6ZVX7 275 aaPredicted RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 RPS27LQ71UM5 84 aaKnown RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 CD163Q86VB7 1156 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 SLC22A16Q86VW1 577 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 CEP112Q8N8E3 955 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 OR4F6Q8NGB9 312 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 FAM57AQ8TBR7 257 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 UCN3Q969E3 161 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 DMRTA2Q96SC8 542 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 FAM173AQ9BQD7 235 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ERVK-6Q9BXR3 956 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 DEFB127Q9H1M4 99 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ELOVL6Q9H5J4 265 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 RUBCNLQ9H714 662 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 SEMA4BQ9NPR2 832 aaPredicted RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 AHSPQ9NZD4 102 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ADAM29Q9UKF5 820 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 ERVK-19Q9WJR5 959 aa12.77□□□□□ -0.37
PCNX4-209ENST00000555569 PHF3Q92576 2039 aaKnown RBP12.77□□□□□ -0.37
PCNX4-209ENST00000555569 A8MT66 165 aa12.76□□□□□ -0.37
PCNX4-209ENST00000555569 ADAM10O14672 748 aa12.76□□□□□ -0.37
PCNX4-209ENST00000555569 PDE9AO76083 593 aa12.76□□□□□ -0.37
PCNX4-209ENST00000555569 GLSO94925 669 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms