RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 PDE7AQ13946 482 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 TERF2Q15554 542 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 ELAVL1Q15717 326 aaKnown RBP13.38□□□□□ -0.27
CHD8-208ENST00000555301 PDCD4Q53EL6 469 aaKnown RBP13.38□□□□□ -0.27
CHD8-208ENST00000555301 SFT2D3Q587I9 215 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 TMEM198Q66K66 360 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 NDUFAF7Q7L592 441 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 NATD1Q8N6N6 113 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 OR11G2Q8NGC1 345 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 EXOSC8Q96B26 276 aaKnown RBP13.38□□□□□ -0.27
CHD8-208ENST00000555301 C8orf44Q96CB5 159 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 PPCDCQ96CD2 204 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 FER1L6-AS2Q96M78 137 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 DGAT2Q96PD7 388 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 TUBB6Q9BUF5 446 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 ZNF700Q9H0M5 742 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 SLC35C2Q9NQQ7 365 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 C5AR2Q9P296 337 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 ATP6V1HQ9UI12 483 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 ADAM21Q9UKJ8 722 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 GPR45Q9Y5Y3 372 aa13.38□□□□□ -0.27
CHD8-208ENST00000555301 IGHV1-45A0A0A0MS14 117 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 NSG1A0A0A6YYJ2 146 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 HPP00738 406 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 COX6A1P12074 109 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 ICAM2P13598 275 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CPMP14384 443 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 TNNI3P19429 210 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 DRD4P21917 467 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 GALNSP34059 522 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 MPIP34949 423 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 RRADP55042 308 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 EEF1A2Q05639 463 aaKnown RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 ATP1A4Q13733 1029 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 PCOLCEQ15113 449 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CEBPEQ15744 281 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 DPY19L1Q2PZI1 675 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 ATP1A1-AS1Q5TC04 95 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 PAPD4Q6PIY7 484 aaKnown RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 SPATA21Q7Z572 469 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 RIMKLAQ8IXN7 391 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 MIER2Q8N344 545 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 LRRC25Q8N386 305 aaPredicted RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 TMEM102Q8N9M5 508 aaPredicted RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 GLB1L3Q8NCI6 653 aaPredicted RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 SNRNP27Q8WVK2 155 aaKnown RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 DAZLQ92904 295 aaKnown RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 CNRIP1Q96F85 164 aaPredicted RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 ZNF681Q96N22 645 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CNTNAP3BQ96NU0 1288 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 ZBTB18Q99592 522 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CNTNAP3Q9BZ76 1288 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 FAM107BQ9H098 131 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 EPN3Q9H201 632 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CPNE5Q9HCH3 593 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 SDR39U1Q9NRG7 319 aaPredicted RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 PNO1Q9NRX1 252 aaKnown RBP13.37□□□□□ -0.27
CHD8-208ENST00000555301 MRGBPQ9NV56 204 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 ZIM2Q9NZV7 527 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 SH3BP4Q9P0V3 963 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 FBXL4Q9UKA2 621 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 MAN2B2Q9Y2E5 1009 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 CLCA3PQ9Y6N3 262 aa13.37□□□□□ -0.27
CHD8-208ENST00000555301 SAGE2PA6NJ88 616 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 GABRR3A8MPY1 467 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 ANKRD28O15084 1053 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 SEC24DO94855 1032 aaPredicted RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 ATP1B1P05026 303 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 NTSP30990 170 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 FEN1P39748 380 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 MRPL19P49406 292 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 ATP4BP51164 291 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 AP2B1P63010 937 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 SRSF11Q05519 484 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 EXT1Q16394 746 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 CPTPQ5TA50 214 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 CPZQ66K79 652 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 CAMKMTQ7Z624 323 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 KRTCAP2Q8N6L1 136 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 OR14A16Q8NHC5 309 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 TESCQ96BS2 214 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 MARK4Q96L34 752 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 BBS4Q96RK4 519 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 ELAC2Q9BQ52 826 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 WDR77Q9BQA1 342 aaPredicted RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 MESP1Q9BRJ9 268 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 RABEP2Q9H5N1 569 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 G3BP2Q9UN86 482 aaKnown RBP13.36□□□□□ -0.27
CHD8-208ENST00000555301 FER1L5A0AVI2 2057 aa13.36□□□□□ -0.27
CHD8-208ENST00000555301 IGHV3-20A0A0C4DH32 117 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 MYOCOSA0A1B0GUC4 107 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 MYO1GB0I1T2 1018 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 C17orf105B2RV13 164 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 PDPK1O15530 556 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 SHOX2O60902 331 aaPredicted RBP13.35□□□□□ -0.27
CHD8-208ENST00000555301 SLC22A3O75751 556 aa13.35□□□□□ -0.27
CHD8-208ENST00000555301 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms