RNA–Protein interactions for RNA: ENST00000554365.1

SPTLC2-202, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-202ENST00000554365 SNRPNP63162 240 aaKnown RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 ADORA2A-AS1P86434 159 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 HMGCS1Q01581 520 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 HYAL2Q12891 473 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 CSTF3Q12996 717 aaKnown RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 C3AR1Q16581 482 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 C10orf62Q5T681 223 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 XKRXQ6PP77 449 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 SPATA21Q7Z572 469 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 CPLX4Q7Z7G2 160 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 DDIASQ8IXT1 998 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 REPS1Q96D71 796 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 TM4SF19Q96DZ7 209 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 THAP11Q96EK4 314 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 OR52B2Q96RD2 323 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 SIKE1Q9BRV8 207 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 TMEM120AQ9BXJ8 343 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 MS4A8Q9BY19 250 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 WDR55Q9H6Y2 383 aaPredicted RBP13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 BRF2Q9HAW0 419 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 GIMAP2Q9UG22 337 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 ZFP69BQ9UJL9 534 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 TINAGQ9UJW2 476 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 PDZD2O15018 2839 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 MYO7BQ6PIF6 2116 aa13.13□□□□□ -0.31
SPTLC2-202ENST00000554365 CPAMD8Q8IZJ3 1885 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 A0A0G2JND7 137 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ATP6AP2A0A1C7CYW4 349 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 TRPC5OSA6NMA1 111 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 C4orf51C9J302 202 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 TXNDC9O14530 226 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 CLEC3AO75596 197 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ATP6AP2O75787 350 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 STATHP02808 62 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 HSD3B1P14060 373 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 PRPH2P23942 346 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 HSD3B2P26439 372 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 GSTM2P28161 218 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 EPHA3P29320 983 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 SERPINB1P30740 379 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 GRK3P35626 688 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 AVPR1BP47901 424 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ST13P50502 369 aaKnown RBP13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 SMSP52788 366 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 DDX39BQ13838 428 aaKnown RBP13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 NDUFA9Q16795 377 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 BTBD16Q32M84 506 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 LANCL3Q6ZV70 420 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 LARP4Q71RC2 724 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 HOMEZQ8IX15 550 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 BEST3Q8N1M1 668 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ARHGEF39Q8N4T4 335 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 TTLQ8NG68 377 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 OR9A4Q8NGU2 314 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 NT5CQ8TCD5 201 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ACTRT2Q8TDY3 377 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 SEC16BQ96JE7 1060 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 MAGED4Q96JG8 741 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 CCT7Q99832 543 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 MACROD1Q9BQ69 325 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 TRIM8Q9BZR9 551 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 VN1R1Q9GZP7 353 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 AKTIPQ9H8T0 292 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 KLHL1Q9NR64 748 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 ADGRE2Q9UHX3 823 aa13.12□□□□□ -0.31
SPTLC2-202ENST00000554365 GOLGA8QA0A0J9YX86 632 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 GOLGA8OA6NCC3 632 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ANKDD1BA6NHY2 528 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 GOLGA8NF8WBI6 632 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 SLC28A1O00337 649 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 DIAPH2O60879 1101 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 TGFB1P01137 390 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 HNRNPH1P31943 449 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 TBL3Q12788 808 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 FAM53BQ14153 422 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ADPRMQ3LIE5 342 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ACER2Q5QJU3 275 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 CPEB2Q7Z5Q1 589 aaKnown RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 UBE3DQ7Z6J8 389 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ASPGQ86U10 573 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 GBP7Q8N8V2 638 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 C11orf24Q96F05 449 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 HES7Q9BYE0 225 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 SLC6A16Q9GZN6 736 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 TSPAN10Q9H1Z9 355 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 OR51B5Q9H339 312 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 ANKRD10Q9NXR5 420 aa13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 C19orf25Q9UFG5 118 aaPredicted RBP13.11□□□□□ -0.31
SPTLC2-202ENST00000554365 AKAP9Q99996 3911 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 LRIT2A6NDA9 550 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 C19orf84I3L1E1 186 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 SH3BGRLO75368 114 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 RSL1D1O76021 490 aaKnown RBP13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 SERPINA6P08185 405 aa13.1□□□□□ -0.31
SPTLC2-202ENST00000554365 ARFIP2P53365 341 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms