RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 VN1R1Q9GZP7 353 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 TSPAN10Q9H1Z9 355 aaPredicted RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SPNS1Q9H2V7 528 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 CLK4Q9HAZ1 481 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 EML4Q9HC35 981 aaKnown RBP7.22□□□□□ -1.25
ABCD4-220ENST00000553998 KLHL1Q9NR64 748 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 ST6GALNAC2Q9UJ37 374 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SNX6Q9UNH7 406 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 RNF6Q9Y252 685 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 SLC22A7Q9Y694 548 aa7.22□□□□□ -1.25
ABCD4-220ENST00000553998 A0A088AWK7 358 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 NKX2-6A6NCS4 301 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TMEM114B3SHH9 223 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 H0YIG0 161 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 FOXE1O00358 373 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 FFAR3O14843 346 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 GPR42O15529 346 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 NDUFS4O43181 175 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNHIT1O43257 154 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 NME2P1O60361 137 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 MAN1A2O60476 641 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 SEC24DO94855 1032 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 KRT6AP02538 564 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 KRT6BP04259 564 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF24P17028 368 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF10P21506 573 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 NME2P22392 152 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TRHRP34981 398 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 PTGS2P35354 604 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ARL1P40616 181 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 KRT6CP48668 564 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ARFIP1P53367 373 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 WDR4P57081 412 aaKnown RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 SKP1P63208 163 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ADAM8P78325 824 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 LTBQ06643 244 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 IFT88Q13099 833 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 RCN2Q14257 317 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 HERC3Q15034 1050 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 CPSF6Q16630 551 aaKnown RBP eCLIP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 SYT16Q17RD7 645 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 HKDC1Q2TB90 917 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 BTBD16Q32M84 506 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ADPRMQ3LIE5 342 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TMEM35AQ53FP2 167 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 FRG2Q64ET8 278 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 FCRLBQ6BAA4 426 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TTC19Q6DKK2 380 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TMEM214Q6NUQ4 689 aaKnown RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 LETMD1Q6P1Q0 360 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ABHD13Q7L211 337 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ANKRD37Q7Z713 158 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 TMEM200AQ86VY9 491 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ARMC10Q8N2F6 343 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 AFAP1L2Q8N4X5 818 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 PLPP5Q8NEB5 264 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 SRFBP1Q8NEF9 429 aaKnown RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 OR4F6Q8NGB9 312 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 C16orf52Q8NHV5 167 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 WDR20Q8TBZ3 569 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF473Q8WTR7 871 aaKnown RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 RND1Q92730 232 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZBTB9Q96C00 473 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 FRG2BQ96QU4 278 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 CENPKQ9BS16 269 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 MECRQ9BV79 373 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 YIPF2Q9BWQ6 316 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ELOVL6Q9H5J4 265 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 KCNK13Q9HB14 408 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 MID1IP1Q9NPA3 183 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 C19orf25Q9UFG5 118 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF225Q9UK10 706 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 ZNF490Q9ULM2 529 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 RNF11Q9Y3C5 154 aa7.21□□□□□ -1.26
ABCD4-220ENST00000553998 NSD1Q96L73 2696 aaPredicted RBP7.21□□□□□ -1.26
ABCD4-220ENST00000553998 CACNA1CQ13936 2221 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 A0A0A6YYC8 382 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 IGHV3-20A0A0C4DH32 117 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 A0A1B0GTH9 108 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 SERTM1A2A2V5 107 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 LRIT2A6NDA9 550 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 GABRR3A8MPY1 467 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 I3L1I5 382 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PPP6CO00743 305 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 UBFD1O14562 309 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 KLF11O14901 512 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 P2RX6O15547 441 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PROM1O43490 865 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 CRCPO75575 148 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 SLC25A12O75746 678 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 OR4F21O95013 312 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 FGF4P08620 206 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PCNAP12004 261 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 NEFHP12036 1026 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 HSD3B1P14060 373 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 ALOX12P18054 663 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 TSPAN8P19075 237 aa7.2□□□□□ -1.26
ABCD4-220ENST00000553998 PTX3P26022 381 aaPredicted RBP7.2□□□□□ -1.26
ABCD4-220ENST00000553998 HSD3B2P26439 372 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms