RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 SCN3AQ9NY46 2000 aa11.55□□□□□ -0.56
SPTB-206ENST00000553938 SNRNP200O75643 2136 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 AGAP14A8MT82 685 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 RNGTTO60942 597 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 SPINT3P49223 89 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 PUM1Q14671 1186 aaKnown RBP eCLIP11.54□□□□□ -0.56
SPTB-206ENST00000553938 RFX4Q33E94 735 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TMEM65Q6PI78 240 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SHFQ7M4L6 423 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 NPAS3Q8IXF0 933 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SYT14Q8NB59 555 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 HJURPQ8NCD3 748 aaPredicted RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 OR4M2Q8NGB6 313 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 DEDD2Q8WXF8 326 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TTC9Q92623 222 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TMEM80Q96HE8 168 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 WRAP53Q9BUR4 548 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 SLAMF7Q9NQ25 335 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 DENND4CQ5VZ89 1909 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TEX51A0A1B0GUA7 166 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 GFYI3L273 518 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 PRKRAO75569 313 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 FCER2P06734 321 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 ALPPL2P10696 532 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 RPS19P39019 145 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 IL18R1Q13478 541 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 STARD3Q14849 445 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 FLYWCH1Q4VC44 716 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 CFAP77Q6ZQR2 320 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TMPRSS9Q7Z410 1059 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SFTPA1Q8IWL2 248 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 UBQLNLQ8IYU4 475 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 RASGEF1AQ8N9B8 481 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 OR8K3Q8NH51 312 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TCEAL4Q96EI5 215 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SLC6A18Q96N87 628 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SMAD5Q99717 465 aaKnown RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 WACQ9BTA9 647 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 DOHHQ9BU89 302 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SAV1Q9H4B6 383 aaPredicted RBP11.54□□□□□ -0.56
SPTB-206ENST00000553938 SUV39H2Q9H5I1 410 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 LIN7BQ9HAP6 207 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TAS2R9Q9NYW1 312 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SPASTQ9UBP0 616 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 KIAA1671Q9BY89 1806 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 GON4LQ3T8J9 2241 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 NEDD8-MDP1E9PL57 170 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 E9PQ18 207 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SMLR1H3BR10 107 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 ATG13O75143 517 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 ENTPD6O75354 484 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 APOA1P02647 267 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 SERPINA4P29622 427 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 CD79BP40259 229 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 HOXC5Q00444 222 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 LRRC74AQ0VAA2 488 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 TPRG1Q6ZUI0 275 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 RNF180Q86T96 592 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 ATCAYQ86WG3 371 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 OR4C15Q8NGM1 316 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 MACROD1Q9BQ69 325 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 HDHD5Q9BXW7 423 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 DUSP12Q9UNI6 340 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 PCDHGB6Q9Y5F9 930 aa11.54□□□□□ -0.56
SPTB-206ENST00000553938 NPC1O15118 1278 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 CSF2P04141 144 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 CTSLP07711 333 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 RPL35P42766 123 aaKnown RBP11.53□□□□□ -0.56
SPTB-206ENST00000553938 SEC13P55735 322 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 GPR68Q15743 365 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 C22orf39Q6P5X5 142 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 LRRC70Q7Z2Q7 622 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 SVOPQ8N4V2 548 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 ZFP41Q8N8Y5 198 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 WDR36Q8NI36 951 aaKnown RBP11.53□□□□□ -0.56
SPTB-206ENST00000553938 IGSF21Q96ID5 467 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 RNF170Q96K19 258 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 ANKRA2Q9H9E1 313 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 ACER3Q9NUN7 267 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 NOSIPQ9Y314 301 aaKnown RBP11.53□□□□□ -0.56
SPTB-206ENST00000553938 TP53BP1Q12888 1972 aaPredicted RBP11.53□□□□□ -0.56
SPTB-206ENST00000553938 CLDN24A6NM45 220 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 DVL2O14641 736 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 B4GALT2O60909 372 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 OR5F1O95221 314 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 KLK1P06870 262 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 CTSAP10619 480 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 CHMP24386 653 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 HNF4AP41235 474 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 IL12RB1P42701 662 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 TAS2R50P59544 299 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 GARNL3Q5VVW2 1013 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 RETSATQ6NUM9 610 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 COMMD6Q7Z4G1 85 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 TRIM48Q8IWZ4 208 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 UBASH3BQ8TF42 649 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 CHAC2Q8WUX2 184 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 GABARAPL3Q9BY60 117 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 SNTG1Q9NSN8 517 aa11.53□□□□□ -0.56
SPTB-206ENST00000553938 EHD3Q9NZN3 535 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms