RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 CCDC153Q494R4 210 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 HIST2H2AA3Q6FI13 130 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MED27Q6P2C8 311 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 ZNF793Q6ZN11 406 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 C16orf47Q6ZP98 133 aaPredicted RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MDGA2Q7Z553 956 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 UBE3DQ7Z6J8 389 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MILR1Q7Z6M3 343 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 SULF2Q8IWU5 870 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 CHERPQ8IWX8 916 aaKnown RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 GHDCQ8N2G8 530 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 TMEM156Q8N614 296 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 CDYL2Q8N8U2 506 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 ANKRD42Q8N9B4 389 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 OR7G3Q8NG95 312 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 OR4F6Q8NGB9 312 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MGARPQ8TDB4 240 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 ZNF473Q8WTR7 871 aaKnown RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 KCNC2Q96PR1 638 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MAPKAP1Q9BPZ7 522 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 MS4A8Q9BY19 250 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 GSTO2Q9H4Y5 243 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 LIN28AQ9H9Z2 209 aaKnown RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 TMBIM4Q9HC24 238 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 ZNF225Q9UK10 706 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 TMCO1Q9UM00 188 aa8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 KLF13Q9Y2Y9 288 aaPredicted RBP8.43□□□□□ -1.06
SDR39U1-207ENST00000553937 NINQ8N4C6 2090 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ANKRD17O75179 2603 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 UQCRHLA0A096LP55 91 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CCDC189A1A4V9 331 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 SYNDIG1LA6NDD5 238 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TMEM200CA6NKL6 621 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 KLRC4-KLRK1H3BQV0 150 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 UBFD1O14562 309 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TFECO14948 347 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 PEX1O43933 1283 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 HS6ST1O60243 411 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CTNSO60931 367 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 LDB3O75112 727 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 SASH3O75995 380 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 OR2J2O76002 312 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ZFAND5O76080 213 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CLDN9O95484 217 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ETHE1O95571 254 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 IFNA16P05015 189 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ATP5A1P25705 553 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 HTR1EP28566 365 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 PTGER1P34995 402 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CASP2P42575 452 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 HTR6P50406 440 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 SSR4P51571 173 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 FOXA1P55317 472 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 GPR85P60893 370 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ID2Q02363 134 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 STX4Q12846 297 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 RCN2Q14257 317 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CDSNQ15517 529 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ZNF630Q2M218 657 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CFAP157Q5JU67 520 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CES4AQ5XG92 561 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TTC19Q6DKK2 380 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 GRHL2Q6ISB3 625 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 XKRXQ6PP77 449 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 C3P1Q6ZMU1 363 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 FGD2Q7Z6J4 655 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 LCA5Q86VQ0 697 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 MCEMP1Q8IX19 187 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 LAS2Q8IYD9 372 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TMEM132CQ8N3T6 1108 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ACOT4Q8N9L9 421 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 POGLUT1Q8NBL1 392 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 HUS1BQ8NHY5 278 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 AGAP11Q8TF27 550 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 PTPMT1Q8WUK0 201 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 PHF12Q96QT6 1004 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 PAIP2Q9BPZ3 127 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TBCDQ9BTW9 1192 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 GATA5Q9BWX5 397 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ALOXE3Q9BYJ1 711 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ROGDIQ9GZN7 287 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ZNF395Q9H8N7 513 aaPredicted RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 LYRM4Q9HD34 91 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 OXSMQ9NWU1 459 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 KCMF1Q9P0J7 381 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 ERVK-11Q9UQG0 969 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 YARS2Q9Y2Z4 477 aaKnown RBP8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 MEMO1Q9Y316 297 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 FIS1Q9Y3D6 152 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 TIMM22Q9Y584 194 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 CLCA3PQ9Y6N3 262 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 OTOGQ6ZRI0 2925 aa8.42□□□□□ -1.06
SDR39U1-207ENST00000553937 A0A1B0GTH9 108 aa8.41□□□□□ -1.06
SDR39U1-207ENST00000553937 A8MVJ9 347 aa8.41□□□□□ -1.06
SDR39U1-207ENST00000553937 C17orf105B2RV13 164 aa8.41□□□□□ -1.06
SDR39U1-207ENST00000553937 WWP2O00308 870 aa8.41□□□□□ -1.06
SDR39U1-207ENST00000553937 PRRG2O14669 202 aa8.41□□□□□ -1.06
SDR39U1-207ENST00000553937 CDC40O60508 579 aaKnown RBP eCLIP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms