RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 GOLGA6L19H0YKK7 550 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 MFAP3LO75121 409 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 SNX4O95219 450 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 PAMP19021 973 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 HNRNPH1P31943 449 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 THBS2P35442 1172 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 MASP1P48740 699 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 NAP1L1P55209 391 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 SRSF2Q01130 221 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 OCRLQ01968 901 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 OASLQ15646 514 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 NTRK2Q16620 822 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 FNDC7Q5VTL7 733 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 SCIMPQ6UWF3 145 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 NXPE4Q6UWF7 544 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF704Q6ZNC4 412 aaPredicted RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 SH2D5Q6ZV89 423 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 ADGRE4PQ86SQ3 457 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 KIAA1328Q86T90 577 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 PACS2Q86VP3 889 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 DENND6AQ8IWF6 608 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF611Q8N823 705 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 TRMT61AQ96FX7 289 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 RILPQ96NA2 401 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 QRFPRQ96P65 431 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 EIF2B3Q9NR50 452 aaKnown RBP12.56□□□□□ -0.4
PRPF39-204ENST00000553605 PAK5Q9P286 719 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 FETUBQ9UGM5 382 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 DYRK1BQ9Y463 629 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 COMMD10Q9Y6G5 202 aa12.56□□□□□ -0.4
PRPF39-204ENST00000553605 A0A1W2PNV4 684 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 PABPN1LA6NDY0 278 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 BTNL10A8MVZ5 291 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 H0Y3Z8 333 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 C16orf97H3BN30 126 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 TP53I11O14683 189 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 KCNAB3O43448 404 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 LIASO43766 372 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 MBD3O95983 291 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 IGKV3-11P04433 115 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 COX7A2P14406 83 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 POU2F1P14859 743 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 CCKARP32238 428 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 RGS4P49798 205 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 PLA2G16P53816 162 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 RPS4XP62701 263 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ID2Q02363 134 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 SRYQ05066 204 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 C6orf52Q5T4I8 152 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 BICRALQ6AI39 1079 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ZNF474Q6S9Z5 364 aaPredicted RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 C22orf34Q6ZV56 151 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 TMPRSS11BQ86T26 416 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 YRDCQ86U90 279 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 MYO1HQ8N1T3 1032 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 CCDC89Q8N998 374 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ATL1Q8WXF7 558 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ROBO4Q8WZ75 1007 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 CCT6BQ92526 530 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 STARD4Q96DR4 205 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 CALR3Q96L12 384 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 SERINC2Q96SA4 455 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 SLC39A3Q9BRY0 314 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 PLA2G12AQ9BZM1 189 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 RYDENQ9NUL5 291 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ELOVL5Q9NYP7 299 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 TRMT6Q9UJA5 497 aaKnown RBP12.55□□□□□ -0.4
PRPF39-204ENST00000553605 LAMP3Q9UQV4 416 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 MAD1L1Q9Y6D9 718 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 ROS1P08922 2347 aa12.55□□□□□ -0.4
PRPF39-204ENST00000553605 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.54□□□□□ -0.42e-11■■■■□ 23.4
PRPF39-204ENST00000553605 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-204ENST00000553605 LRRC14BA6NHZ5 514 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 HS3ST1O14792 307 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 SIX3O95343 332 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-204ENST00000553605 ZSCAN5DPP0CG00 497 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 CHMP24386 653 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 CERS1P27544 350 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 GCKP35557 465 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 ACVR1BP36896 505 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 MTTPP55157 894 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 THOC5Q13769 683 aaKnown RBP12.54□□□□□ -0.4
PRPF39-204ENST00000553605 FAM83FQ8NEG4 500 aaPredicted RBP12.54□□□□□ -0.4
PRPF39-204ENST00000553605 FBXL8Q96CD0 374 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 ART5Q96L15 291 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 GAL3ST4Q96RP7 486 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 KCNK17Q96T54 332 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 TRIM54Q9BYV2 358 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 CLCF1Q9UBD9 225 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 MAPRE3Q9UPY8 281 aa12.54□□□□□ -0.4
PRPF39-204ENST00000553605 MED12LQ86YW9 2145 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 HRKO00198 91 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 DYRK3O43781 588 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 GPRIN2O60269 458 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 GUCA1CO95843 209 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 PLAUP00749 431 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 KCNJ5P48544 419 aa12.53□□□□□ -0.4
PRPF39-204ENST00000553605 AP1S2P56377 157 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms