RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 GTF3AQ92664 365 aaKnown RBP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 PNPLA2Q96AD5 504 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 MOCOSQ96EN8 888 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 C16orf58Q96GQ5 468 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 COG3Q96JB2 828 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 DCTN5Q9BTE1 182 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 KRTAP2-2Q9BYT5 123 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 NMUR1Q9HB89 426 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.28□□□□□ -1.72
SYNE2-210ENST00000553455 PLEKHA6Q9Y2H5 1048 aa4.28□□□□□ -1.72
SYNE2-210ENST00000553455 KIF7Q2M1P5 1343 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 LOC390937A0A1W2PQ73 354 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 EPM2AB3EWF7 344 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 K7EQG2 157 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 ADAM12O43184 909 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 ZCCHC18P0CG32 403 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 CD1DP15813 335 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 RPA1P27694 616 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 PRDX6P30041 224 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 ID1P41134 155 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 PEX3P56589 373 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 HYAL1Q12794 435 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 ITPK1Q13572 414 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 CMPK2Q5EBM0 449 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 OTUD3Q5T2D3 398 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-210ENST00000553455 C1orf189Q5VU69 101 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 HIST2H2AA3Q6FI13 130 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 CDHR3Q6ZTQ4 885 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 MCM10Q7L590 875 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 TBC1D10CQ8IV04 446 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 LEMD2Q8NC56 503 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 CHDHQ8NE62 594 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-210ENST00000553455 SPPL2AQ8TCT8 520 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 TCP11Q8WWU5 503 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 NABP1Q96AH0 204 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 MCRIP2Q9BUT9 160 aaKnown RBP4.27□□□□□ -1.73
SYNE2-210ENST00000553455 FTHL17Q9BXU8 183 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 KRT23Q9C075 422 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 WDR41Q9HAD4 459 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 SLC25A19Q9HC21 320 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 NUDT4Q9NZJ9 180 aa4.27□□□□□ -1.73
SYNE2-210ENST00000553455 UBE4BO95155 1302 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 ZMYM6O95789 1325 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 ARHGEF33A8MVX0 844 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 FBP2O00757 339 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 OR6B1O95007 311 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 PDGFBP01127 241 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 PTPN4P29074 926 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 ACADSBP45954 432 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 FKBP3Q00688 224 aaKnown RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 KLF5Q13887 457 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 ZNF146Q15072 292 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 TRADDQ15628 312 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 C14orf177Q52M58 125 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 C2CD6Q53TS8 623 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 ISLR2Q6UXK2 745 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 YRDCQ86U90 279 aaKnown RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 KRTAP7-1Q8IUC3 87 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 DQX1Q8TE96 717 aaKnown RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 CAPNS2Q96L46 248 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 LINC00479Q96M42 142 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 TNFRSF13CQ96RJ3 184 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 CBWD1Q9BRT8 395 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 VPS54Q9P1Q0 977 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 HOOK1Q9UJC3 728 aaKnown RBP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 NIP7Q9Y221 180 aaKnown RBP eCLIP4.26□□□□□ -1.73
SYNE2-210ENST00000553455 KLHDC2Q9Y2U9 406 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 CLCA3PQ9Y6N3 262 aa4.26□□□□□ -1.73
SYNE2-210ENST00000553455 FER1L5A0AVI2 2057 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 MEI4A8MW99 385 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ARPC1BO15143 372 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 PTBP3O95758 552 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 FCER2P06734 321 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 APRTP07741 180 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ADORA3P0DMS8 318 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 GNSP15586 552 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 RPL9P32969 192 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 RPS4XP62701 263 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 SMC1AQ14683 1233 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 KARSQ15046 597 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 CARTPTQ16568 116 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ZNF497Q6ZNH5 498 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 GET4Q7L5D6 327 aaPredicted RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 FAM131BQ86XD5 332 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 LRRC17Q8N6Y2 441 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ZNRF1Q8ND25 227 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 OR4F5Q8NH21 305 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 PTPRUQ92729 1446 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 TMEM45BQ96B21 275 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 C18orf12Q96KH6 178 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 RCHY1Q96PM5 261 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ACCSQ96QU6 501 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 KCNK16Q96T55 309 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 EGLN1Q9GZT9 426 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 HPS4Q9NQG7 708 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 HOMER3Q9NSC5 361 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 DEPPQ9NTK1 212 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 SOHLH2Q9NX45 425 aa4.25□□□□□ -1.73
SYNE2-210ENST00000553455 CNOT2Q9NZN8 540 aaKnown RBP4.25□□□□□ -1.73
SYNE2-210ENST00000553455 ACTR3BQ9P1U1 418 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms