RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	LRRC25	Q8N386	305 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	D2HGDH	Q8N465	521 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	EID2	Q8N6I1	236 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	ANKFN1	Q8N957	763 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	ADCY4	Q8NFM4	1077 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	OR5T3	Q8NGG3	340 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	OR56A1	Q8NGH5	318 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	OR9A4	Q8NGU2	314 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	OR2I1P	Q8NGU4	316 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	FBXO30	Q8TB52	745 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	ADAMTS18	Q8TE60	1221 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	TANK	Q92844	425 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	PPWD1	Q96BP3	646 aa	Known RBP	11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	SLC47A1	Q96FL8	570 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	SLC35G5	Q96KT7	338 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	RNF145	Q96MT1	663 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	SEPHS2	Q99611	448 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	ASPSCR1	Q9BZE9	553 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	ZNF768	Q9H5H4	540 aa	Known RBP	11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	MAGIX	Q9H6Y5	334 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	AGPAT4	Q9NRZ5	378 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	IRAK4	Q9NWZ3	460 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	RPS6KA6	Q9UK32	745 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480	SAMD4A	Q9UPU9	718 aa	Known RBP	11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480		V9GYQ6	96 aa		11.96	□□□□□ -0.49
CACNB3-223	ENST00000552480		A0A0A6YYC8	382 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480		A0A1W2PS29	197 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	HYKK	A2RU49	373 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	CPED1	A4D0V7	1026 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	BLACE	A4D250	179 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480		I3L1I5	382 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	EMC8	O43402	210 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	CHST10	O43529	356 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	FOXS1	O43638	330 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	B4GALT2	O60909	372 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	PRKD3	O94806	890 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	MED26	O95402	600 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	FH	P07954	510 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	MSL3P1	P0C860	447 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	RNH1	P13489	461 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	NELFE	P18615	380 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	MPL	P40238	635 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	AVPR1B	P47901	424 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	SEPHS1	P49903	392 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	XK	P51811	444 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	CASP9	P55211	416 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	SIM1	P81133	766 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	TXNL4A	P83876	142 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	EEF1A2	Q05639	463 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	TP53BP2	Q13625	1128 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	SCARB2	Q14108	478 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	KCNAB1	Q14722	419 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	GRM7	Q14831	915 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	C16orf72	Q14CZ0	275 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	ATP6AP1	Q15904	470 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	LPAL2	Q16609	132 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	GRAMD1B	Q3KR37	738 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	LRRC23	Q53EV4	343 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	SNAP47	Q5SQN1	464 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	WLS	Q5T9L3	541 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	INTS11	Q5TA45	600 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	BHLHB9	Q6PI77	547 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	EIF3M	Q7L2H7	374 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	AMIGO2	Q86SJ2	522 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	KBTBD2	Q8IY47	623 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	HORMAD2	Q8N7B1	307 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	FAM86B1	Q8N7N1	296 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	DNAJC9	Q8WXX5	260 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	MAL2	Q969L2	176 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZNF184	Q99676	751 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	DPYSL5	Q9BPU6	564 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	NUDT22	Q9BRQ3	303 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	CHID1	Q9BWS9	393 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	SPRTN	Q9H040	489 aa	Predicted RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	C3orf14	Q9HBI5	128 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	A4GALT	Q9NPC4	353 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	ZCCHC3	Q9NUD5	404 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	THUMPD1	Q9NXG2	353 aa	Known RBP	11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	GMEB2	Q9UKD1	530 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	CLCA2	Q9UQC9	943 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	ANGPT4	Q9Y264	503 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	DTNA	Q9Y4J8	743 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	LRRC42	Q9Y546	428 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	PCDHGA5	Q9Y5G8	931 aa		11.95	□□□□□ -0.5
CACNB3-223	ENST00000552480	ADAMTS9	Q9P2N4	1935 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	TMEM150C	B9EJG8	249 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480		H3BMH7	237 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	FGF17	O60258	216 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	TPST1	O60507	370 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	GPR75	O95800	540 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ANKRD34C	P0C6C1	535 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CKMT1A	P12532	417 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CPM	P14384	443 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	POR	P16435	677 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	KHK	P50053	298 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	ANXA11	P50995	505 aa	Known RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	DUSP3	P51452	185 aa	Predicted RBP	11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	PRR5	P85299	388 aa		11.94	□□□□□ -0.5
CACNB3-223	ENST00000552480	CDK6	Q00534	326 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms