RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TNFRSF12AQ9NP84 129 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 PSME2Q9UL46 239 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 PCDHA9Q9Y5H5 950 aa17.23■□□□□ 0.35
PRPF40B-216ENST00000552301 SLC28A1O00337 649 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 BIRC5O15392 142 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 RGS14O43566 566 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 TNFSF10P50591 281 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 SH2D4BQ5SQS7 431 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 HSDL2Q6YN16 418 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 TRIM46Q7Z4K8 759 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 ANKRD42Q8N9B4 389 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 CATSPER1Q8NEC5 780 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 CDC26Q8NHZ8 85 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 AGR3Q8TD06 166 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 THAP3Q8WTV1 239 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 PTPMT1Q8WUK0 201 aaPredicted RBP17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 PAIP2Q9BPZ3 127 aaKnown RBP17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 CNPPD1Q9BV87 410 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 EBPLQ9BY08 206 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 PCDHGA10Q9Y5H3 936 aa17.22■□□□□ 0.35
PRPF40B-216ENST00000552301 NBASA2RRP1 2371 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 PGRMC2O15173 223 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 HSPA4LO95757 839 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 SERPINE1P05121 402 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 ANXA4P09525 319 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 SLC35E2P0CK97 266 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 GSTM5P46439 218 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 MLF1P58340 268 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 NR6A1Q15406 480 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 INPP5JQ15735 1006 aaPredicted RBP17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 HHATQ5VTY9 493 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 KANK2Q63ZY3 851 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 SLC48A1Q6P1K1 146 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 ATCAYQ86WG3 371 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 DDIASQ8IXT1 998 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 CLYBLQ8N0X4 340 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 HORMAD2Q8N7B1 307 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 RIT1Q92963 219 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 PPWD1Q96BP3 646 aaKnown RBP17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 TM4SF18Q96CE8 201 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 KLHL29Q96CT2 875 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 TMBIM4Q9HC24 238 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 PFDN4Q9NQP4 134 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 DLGAP4Q9Y2H0 992 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 TRAF6Q9Y4K3 522 aa17.21■□□□□ 0.35
PRPF40B-216ENST00000552301 WASHC1A8K0Z3 465 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 PYCARD-AS1I3L0S3 204 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 CDK2AP1O14519 115 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 ERAL1O75616 437 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 DDAH2O95865 285 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 IL3P08700 152 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 GPR143P51810 404 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 XKP51811 444 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 MAGOHP61326 146 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 RAE1P78406 368 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF763Q0D2J5 394 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 TUBA3CQ13748 450 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 HEPACAMQ14CZ8 416 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 CHI3L2Q15782 390 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 PRR30Q53SZ7 412 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 GALNT18Q6P9A2 607 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 TUBA3EQ6PEY2 450 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 GALNT12Q8IXK2 581 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 CISD2Q8N5K1 135 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM156Q8N614 296 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 OR5L2Q8NGL0 311 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 TWIST2Q8WVJ9 160 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 UCN3Q969E3 161 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 FBXL20Q96IG2 436 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 C5orf34Q96MH7 638 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 NPAS2Q99743 824 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 LRTM1Q9HBL6 345 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 GIMAP4Q9NUV9 329 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 ANKRD10Q9NXR5 420 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 NKIRAS1Q9NYS0 192 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF223Q9UK11 482 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 POLR3HQ9Y535 204 aaPredicted RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 COPG1Q9Y678 874 aaKnown RBP17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF780BQ9Y6R6 833 aa17.2■□□□□ 0.34
PRPF40B-216ENST00000552301 BSNQ9UPA5 3926 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM120BA0PK00 339 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM114B3SHH9 223 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 TMEM233B4DJY2 109 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 MAN1A2O60476 641 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 PRAMEF2O60811 474 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 SEC22BO75396 215 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 FGF4P08620 206 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 CPMP14384 443 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 DRD2P14416 443 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 CD46P15529 392 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 NT5EP21589 574 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 GALNSP34059 522 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 CYB561P49447 251 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 ERVK-8P63133 956 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 ZNF267Q14586 743 aaPredicted RBP17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 OR1C1Q15619 314 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 SPRED3Q2MJR0 410 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 RNF165Q6ZSG1 346 aa17.19■□□□□ 0.34
PRPF40B-216ENST00000552301 MMP21Q8N119 569 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms