RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 MMACHCQ9Y4U1 282 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PCDHGB3Q9Y5G1 929 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 PCNX3Q9H6A9 2034 aa4.92□□□□□ -1.62
HOXB3-213ENST00000552000 EXPH5Q8NEV8 1989 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CTAGE15A4D2H0 777 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ERI2A8K979 691 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 DEFB108AA8MXU0 73 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 C4orf51C9J302 202 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NPIPB6E9PJ23 425 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 GFYI3L273 518 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CTIFO43310 598 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ZBTB14O43829 449 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NRDCO43847 1150 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ERN1O75460 977 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF189O75820 626 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TJP3O95049 919 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 LRATO95237 230 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ESR1P03372 595 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TP53P04637 393 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 IFNA16P05015 189 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 F7P08709 466 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 MPC1LP0DKB6 136 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TMIGD3P0DMS9 266 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ARNTP27540 789 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NMBRP28336 390 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 PTPN7P35236 360 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SKIV2L2P42285 1042 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CCR8P51685 355 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 HNRNPFP52597 415 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 GYS2P54840 703 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ATP5J2P56134 94 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SESN2P58004 480 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CRADDP78560 199 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CCZ1BP86790 482 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CCZ1P86791 482 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 RUNX1T1Q06455 604 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 RGS1Q08116 209 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CRYZQ08257 329 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 FOXF2Q12947 444 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 IKZF1Q13422 519 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 PWP1Q13610 501 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 VEZF1Q14119 521 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CAPRIN1Q14444 709 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 IQCB1Q15051 598 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TTLL9Q3SXZ7 439 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CHRFAM7AQ494W8 412 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 WIPI1Q5MNZ9 446 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SLC22A10Q63ZE4 541 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NIPAL1Q6NVV3 410 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 OPN5Q6U736 354 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CES3Q6UWW8 571 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 UBE2R2Q712K3 238 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 PIWIL4Q7Z3Z4 852 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CLNKQ7Z7G1 428 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SDCCAG8Q86SQ7 713 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CTAGE6Q86UF2 777 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 LRRC25Q8N386 305 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TMEM132CQ8N3T6 1108 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ZNF321PQ8N8H1 164 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 C9orf106Q8NAJ2 232 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 OR8K1Q8NGG5 319 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NT5CQ8TCD5 201 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 PEX13Q92968 403 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TRIB1Q96RU8 372 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 DNAJC7Q99615 494 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TIMP4Q99727 224 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 C19orf24Q9BVV8 132 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 OR8D2Q9GZM6 311 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SPNS1Q9H2V7 528 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 KLHL31Q9H511 634 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NHEJ1Q9H9Q4 299 aaPredicted RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ACKR4Q9NPB9 350 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ADAP2Q9NPF8 381 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 PRTFDC1Q9NRG1 225 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 HOMER3Q9NSC5 361 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 TREX1Q9NSU2 369 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 ZNHIT6Q9NWK9 470 aaKnown RBP4.91□□□□□ -1.62
HOXB3-213ENST00000552000 NDRG3Q9UGV2 375 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 INTUQ9ULD6 942 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 SLC6A5Q9Y345 797 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CLDN16Q9Y5I7 305 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CLCA3PQ9Y6N3 262 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 CMYA5Q8N3K9 4069 aa4.91□□□□□ -1.62
HOXB3-213ENST00000552000 A0A0G2JN53 185 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TRBC2A0A5B9 178 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 MBD3L3A6NE82 208 aaPredicted RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CD8B2A6NJW9 211 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 E7EVH7 732 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TLX2O43763 284 aaPredicted RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CD5LO43866 347 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 TRAPPC6AO75865 159 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 VAPBO95292 243 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 ACSL3O95573 720 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 IFNB1P01574 187 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 PTMAP06454 111 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 APRTP07741 180 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 SAT1P21673 171 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 GDF1P27539 372 aa4.9□□□□□ -1.63
HOXB3-213ENST00000552000 CTNNA1P35221 906 aaKnown RBP4.9□□□□□ -1.63
HOXB3-213ENST00000552000 RPL22P35268 128 aaKnown RBP4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms