RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 FAM58BPP0C7Q3 252 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 NR2F6P10588 404 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 PPIAP62937 165 aaKnown RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 CDSNQ15517 529 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 GLE1Q53GS7 698 aaKnown RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 TTC19Q6DKK2 380 aaPredicted RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 MRM1Q6IN84 353 aaKnown RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 OPN5Q6U736 354 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 RTL4Q6ZR62 310 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 C9orf40Q8IXQ3 194 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 FAM57AQ8TBR7 257 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 DCAKDQ8WVC6 231 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 ART5Q96L15 291 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 DDX31Q9H8H2 851 aaKnown RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 ZBTB26Q9HCK0 441 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 CHST11Q9NPF2 352 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 SEMA4BQ9NPR2 832 aaPredicted RBP15.12■□□□□ 0.01
VPS29-207ENST00000549970 ZNF180Q9UJW8 692 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 PCTPQ9UKL6 214 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 CACNA1CQ13936 2221 aa15.12■□□□□ 0.01
VPS29-207ENST00000549970 A0A1W2PR48 441 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 E9PLN8 166 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 ACOT7O00154 380 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 GPR75O95800 540 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 AIFM1O95831 613 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 IGKV3-11P04433 115 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 COL6A2P12110 1019 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 AGAP20933 346 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 CNTFP26441 200 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 NR0B1P51843 470 aaKnown RBP15.11■□□□□ 0.01
VPS29-207ENST00000549970 HERVK_113P63132 956 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 ERVK-8P63133 956 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 TRAF3Q13114 568 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 BIKQ13323 160 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 FRG2Q64ET8 278 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 FAM47EQ6ZV65 393 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 RPS27LQ71UM5 84 aaKnown RBP15.11■□□□□ 0.01
VPS29-207ENST00000549970 MCEMP1Q8IX19 187 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 SRRM1Q8IYB3 904 aaKnown RBP15.11■□□□□ 0.01
VPS29-207ENST00000549970 ST13P4Q8IZP2 240 aaPredicted RBP15.11■□□□□ 0.01
VPS29-207ENST00000549970 EID3Q8N140 333 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 GOLM1Q8NBJ4 401 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 NUBPLQ8TB37 319 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 UCN3Q969E3 161 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 FBXL20Q96IG2 436 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 FRG2BQ96QU4 278 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 GAL3ST4Q96RP7 486 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 SERPINI1Q99574 410 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 VKORC1Q9BQB6 163 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 NTMT1Q9BV86 223 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 ERVK-6Q9BXR3 956 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 TTTY12Q9BZ98 90 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 RUBCNLQ9H714 662 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 WDR41Q9HAD4 459 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 PSD3Q9NYI0 1048 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 PPT2Q9UMR5 302 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 ERVK-19Q9WJR5 959 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 PKDREJQ9NTG1 2253 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 DNAJC13O75165 2243 aa15.11■□□□□ 0.01
VPS29-207ENST00000549970 ADGRG4Q8IZF6 3080 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 EXOC1LA0A1B0GW35 172 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 ADAM10O14672 748 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SEMA3DO95025 777 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 CLDN14O95500 239 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 P04436 131 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 CCL3P10147 92 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 CNR1P21554 472 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 DNASE1L1P49184 302 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 IFT88Q13099 833 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 ZNF267Q14586 743 aaPredicted RBP15.1■□□□□ 0.01
VPS29-207ENST00000549970 MPEG1Q2M385 716 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SGO1Q5FBB7 561 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 PIGGQ5H8A4 983 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 ARHGAP11AQ6P4F7 1023 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 GK5Q6ZS86 529 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SLC22A16Q86VW1 577 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 OR4F6Q8NGB9 312 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SLC22A8Q8TCC7 542 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 PHF10Q8WUB8 498 aaKnown RBP15.1■□□□□ 0.01
VPS29-207ENST00000549970 RIT1Q92963 219 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SGCZQ96LD1 299 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 DMRTA2Q96SC8 542 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 MRPL57Q9BQC6 102 aaKnown RBP15.1■□□□□ 0.01
VPS29-207ENST00000549970 FAM173AQ9BQD7 235 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 PELOQ9BRX2 385 aaKnown RBP15.1■□□□□ 0.01
VPS29-207ENST00000549970 MRPL46Q9H2W6 279 aaKnown RBP15.1■□□□□ 0.01
VPS29-207ENST00000549970 PLSCR2Q9NRY7 297 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SACM1LQ9NTJ5 587 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.1■□□□□ 0.01
VPS29-207ENST00000549970 NFU1Q9UMS0 254 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 LRBAP50851 2863 aa15.1■□□□□ 0.01
VPS29-207ENST00000549970 IQANK1A0A1B0GTG1 560 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 A0A1W2PS29 197 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 RPS17P08708 135 aaKnown RBP15.09■□□□□ 0.01
VPS29-207ENST00000549970 SNRPAP09012 282 aaKnown RBP15.09■□□□□ 0.01
VPS29-207ENST00000549970 COX6B1P14854 86 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 TSPAN8P19075 237 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 CDH13P55290 713 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 SPRED3Q2MJR0 410 aa15.09■□□□□ 0.01
VPS29-207ENST00000549970 TEX35Q5T0J7 233 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms