RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 CCT3P49368 545 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CLDN2P57739 230 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SLC35A2P78381 396 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 ALDH6A1Q02252 535 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 MVKQ03426 396 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 FZD2Q14332 565 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PUM1Q14671 1186 aaKnown RBP eCLIP9.43□□□□□ -0.94e-9■□□□□ 8.2
RAB5B-206ENST00000549505 MAD2L1BPQ15013 274 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 USP53Q70EK8 1073 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CADM4Q8NFZ8 388 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 BAHD1Q8TBE0 780 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 GIPC3Q8TF64 312 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PHF10Q8WUB8 498 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 APOL4Q9BPW4 351 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 ACAT2Q9BWD1 397 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 DGCR6LQ9BY27 220 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 POLR2J2Q9GZM3 115 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 POLR2J3Q9H1A7 115 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 OSGEPL1Q9H4B0 414 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CCNB1IP1Q9NPC3 277 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 EXD2Q9NVH0 621 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SAMHD1Q9Y3Z3 626 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CROCCQ5TZA2 2017 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PRAMEF33A0A0G2JMD5 474 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 A0A1W2PPC4 97 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 BLACEA4D250 179 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 RTCAO00442 366 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PRAMEF10O60809 474 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SOX30O94993 753 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 AIFM1O95831 613 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 FHP07954 510 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 GGT2P36268 569 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 MAP3K8P41279 467 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SSR2P43308 183 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PRIM2P49643 509 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 ESRRGP62508 458 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 TNFRSF17Q02223 184 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 NPRL3Q12980 569 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 DYNC1I2Q13409 638 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SLC25A30Q5SVS4 291 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 FHL5Q5TD97 284 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CEACAM20Q6UY09 585 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 Q6ZSR6 202 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 GPR141Q7Z602 305 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CCDC71Q8IV32 467 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SNRNP27Q8WVK2 155 aaKnown RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 CNRIP1Q96F85 164 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 RAB33BQ9H082 229 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 TMEM168Q9H0V1 697 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 ANKRD19PQ9H560 264 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 ACTR10Q9NZ32 417 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PDP1Q9P0J1 537 aaPredicted RBP9.43□□□□□ -0.9
RAB5B-206ENST00000549505 P2RX2Q9UBL9 471 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 RAPGEFL1Q9UHV5 662 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 DUSP12Q9UNI6 340 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 SLC22A7Q9Y694 548 aa9.43□□□□□ -0.9
RAB5B-206ENST00000549505 PDZK1P1A8MUH7 402 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 H3BSA7 217 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 HS6ST1O60243 411 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 AGR2O95994 175 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 CD72P21854 359 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 NTSP30990 170 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 POLR2IP36954 125 aaKnown RBP9.42□□□□□ -0.9
RAB5B-206ENST00000549505 STARD6P59095 220 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 FUT5Q11128 374 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 INAVAQ3KP66 663 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 RNLSQ5VYX0 342 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 OFCC1Q8IZS5 231 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 SRMSQ9H3Y6 488 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 LIPT1Q9Y234 373 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ATG4BQ9Y4P1 393 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 MKI67P46013 3256 aaKnown RBP9.42□□□□□ -0.9
RAB5B-206ENST00000549505 A0A087WV62 115 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 A0A1W2PR77 199 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 URADA6NGE7 173 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 C2orf74A8MZ97 194 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 EMC8O43402 210 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 E2F6O75461 281 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 SOX11P35716 441 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 EMP3P54852 163 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 SMIM11AP58511 58 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 RGS1Q08116 209 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 PMS2P3Q13401 168 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 TDGQ13569 410 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 RAPSNQ13702 412 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 RAB39AQ14964 217 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ANKRD34AQ69YU3 496 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ZCCHC12Q6PEW1 402 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 KCTD8Q6ZWB6 473 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 OR2L13Q8N349 312 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 C2orf73Q8N5S3 287 aaPredicted RBP9.42□□□□□ -0.9
RAB5B-206ENST00000549505 TTC29Q8NA56 475 aaPredicted RBP9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ZNF675Q8TD23 568 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ISOC1Q96CN7 298 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 TMEM19Q96HH6 336 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 TRNT1Q96Q11 434 aaKnown RBP9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ZNF607Q96SK3 696 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 ARHGDIGQ99819 225 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 MAPKAP1Q9BPZ7 522 aa9.42□□□□□ -0.9
RAB5B-206ENST00000549505 SPATA5L1Q9BVQ7 753 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms