RNA–Protein interactions for RNA: ENST00000548919.5

RAPGEF3-218, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 2,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-218ENST00000548919 A0A1W2PQL4 384 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ARRDC5A6NEK1 342 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 POLR2EP19388 210 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 DGKGP49619 791 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 DCDC1P59894 354 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 HOXC5Q00444 222 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TAP2Q03519 686 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ILKQ13418 452 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 PIN1Q13526 163 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 E2F2Q14209 437 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 PGBD2Q6P3X8 592 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 USP30Q70CQ3 517 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 VN1R5Q7Z5H4 357 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC7A13Q8TCU3 470 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 PDXPQ96GD0 296 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SNX18Q96RF0 628 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 EFCAB11Q9BUY7 163 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TXNL4BQ9NX01 149 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 DENND4CQ5VZ89 1909 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TRAV19A0A0A6YYK7 116 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 K7ESM1 405 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 MYL12BO14950 172 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 B4GALT2O60909 372 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 MSL3P1P0C860 447 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 UQCRC2P22695 453 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ETV5P41161 510 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TM4SF4P48230 202 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ETV1P50549 477 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 CAV3P56539 151 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 HEPACAMQ14CZ8 416 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 NCF4Q15080 339 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 CDK10Q15131 360 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 C12orf73Q69YU5 71 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 HIST2H2AA3Q6FI13 130 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ERAP2Q6P179 960 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 ADIPOR2Q86V24 386 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 C11orf74Q86VG3 221 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 LSRQ86X29 649 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TRIM48Q8IWZ4 208 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SYT14Q8NB59 555 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC5A11Q8WWX8 675 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 TIFAQ96CG3 184 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 OTUB1Q96FW1 271 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 C11orf54Q9H0W9 315 aaPredicted RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 RPL36Q9Y3U8 105 aaKnown RBP13.43□□□□□ -0.26
RAPGEF3-218ENST00000548919 H1F0P07305 194 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 SRPRAP08240 638 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 CSF3P09919 207 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 XPAP23025 273 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 DDOSTP39656 456 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 ATAT1Q5SQI0 421 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 MFSD4BQ5TF39 518 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 NXPE4Q6UWF7 544 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMC8Q8IU68 726 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 TRAPPC5Q8IUR0 188 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 ADGRF3Q8IZF5 1079 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 DIRAS2Q96HU8 199 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR2AG1Q9H205 316 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 LINC00597Q9H2U6 94 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 CTPS2Q9NRF8 586 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 A0A0B4J293 547 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 ANHXE9PGG2 379 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMCC2O75069 709 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 ELFN1P0C7U0 828 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 GSTM5P46439 218 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 METAP1P53582 386 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 MANFP55145 182 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 FAM214AQ32MH5 1076 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 GLYR1Q49A26 553 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 OR2G6Q5TZ20 316 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 MEDAGQ5VYS4 303 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 SZRD1Q7Z422 152 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 TRMT11Q7Z4G4 463 aaKnown RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 TECPR1Q7Z6L1 1165 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 CAMKK1Q8N5S9 505 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC25A46Q96AG3 418 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 RNF31Q96EP0 1072 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 NELL2Q99435 816 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 SGPP1Q9BX95 441 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 PRRG3Q9BZD7 231 aa13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 PLEKHB1Q9UF11 243 aaPredicted RBP13.42□□□□□ -0.26
RAPGEF3-218ENST00000548919 MTCL1Q9Y4B5 1905 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 FABP12A6NFH5 140 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 M0R3H8 397 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TP53P04637 393 aaPredicted RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 ITGB7P26010 798 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SDC2P34741 201 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 RPL3P39023 403 aaKnown RBP13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 CD83Q01151 205 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SCN1BQ07699 218 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 Q5BKY6 102 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TMEM201Q5SNT2 666 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SNAP47Q5SQN1 464 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 ABI3BPQ7Z7G0 1075 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 GLCCI1Q86VQ1 547 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 TRIM69Q86WT6 500 aa13.41□□□□□ -0.26
RAPGEF3-218ENST00000548919 SLC39A11Q8N1S5 342 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms