RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 ZFP28Q8NHY6 868 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 OR5P2Q8WZ92 322 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 FKBP10Q96AY3 582 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 ANKRD9Q96BM1 317 aaPredicted RBP27.04■■□□□ 1.92
BRF1-213ENST00000548421 INPP5KQ9BT40 448 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 POLR1BQ9H9Y6 1135 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 NDE1Q9NXR1 346 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 SLAMF8Q9P0V8 285 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 PCDHGB4Q9UN71 923 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 MMACHCQ9Y4U1 282 aa27.04■■□□□ 1.92
BRF1-213ENST00000548421 A0A096LPI6 279 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 ERN1O75460 977 aaKnown RBP27.03■■□□□ 1.92
BRF1-213ENST00000548421 CPSF4O95639 269 aaKnown RBP27.03■■□□□ 1.92
BRF1-213ENST00000548421 C6orf47O95873 294 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 MPIP34949 423 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 NCBP2P52298 156 aaKnown RBP eCLIP27.03■■□□□ 1.92
BRF1-213ENST00000548421 NCALDP61601 193 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 ZNF750Q32MQ0 723 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 OR4A15Q8NGL6 344 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 AMDHD1Q96NU7 426 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 GLIPR2Q9H4G4 154 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 IL1RL2Q9HB29 575 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 C14orf105Q9NVL8 296 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 TAS2R1Q9NYW7 299 aa27.03■■□□□ 1.92
BRF1-213ENST00000548421 DLGAP3O95886 979 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 ALBP02768 609 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 CPMP14384 443 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 PTPN4P29074 926 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 CPOXP36551 454 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 GABREP78334 506 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 SLC25A3Q00325 362 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 ID2Q02363 134 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 MINDY4Q4G0A6 757 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 LRIF1Q5T3J3 769 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 DLEU7Q6UYE1 221 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 DNAJC14Q6Y2X3 702 aaPredicted RBP27.02■■□□□ 1.92
BRF1-213ENST00000548421 ZNF517Q6ZMY9 492 aaPredicted RBP27.02■■□□□ 1.92
BRF1-213ENST00000548421 QSOX2Q6ZRP7 698 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 SCUBE1Q8IWY4 988 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 LRRC25Q8N386 305 aaPredicted RBP27.02■■□□□ 1.92
BRF1-213ENST00000548421 STT3BQ8TCJ2 826 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 MR1Q95460 341 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 LRRC58Q96CX6 371 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 PAIP1Q9H074 479 aaKnown RBP27.02■■□□□ 1.92
BRF1-213ENST00000548421 SLC26A1Q9H2B4 701 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 NEUROD4Q9HD90 331 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 FOXJ2Q9P0K8 574 aa27.02■■□□□ 1.92
BRF1-213ENST00000548421 SDK2Q58EX2 2172 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 A0A1W2PS29 197 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 ANP32DO95626 131 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 PORP16435 677 aaPredicted RBP27.01■■□□□ 1.91
BRF1-213ENST00000548421 CDKN2CP42773 168 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 HBA1P69905 142 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 BTG2P78543 158 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 DUSP2Q05923 314 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 STX4Q12846 297 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 MFSD4BQ5TF39 518 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 LCN10Q6JVE6 187 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 C16orf89Q6UX73 402 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 C6orf15Q6UXA7 325 aaPredicted RBP27.01■■□□□ 1.91
BRF1-213ENST00000548421 CCDC116Q8IYX3 515 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 GOT1L1Q8NHS2 421 aaPredicted RBP27.01■■□□□ 1.91
BRF1-213ENST00000548421 SUN3Q8TAQ9 357 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 BTBD10Q9BSF8 475 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 SPRY4Q9C004 299 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 TAS2R9Q9NYW1 312 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 CROTQ9UKG9 612 aa27.01■■□□□ 1.91
BRF1-213ENST00000548421 TEX51A0A1B0GUA7 166 aa27■■□□□ 1.91
BRF1-213ENST00000548421 FXYD1O00168 92 aa27■■□□□ 1.91
BRF1-213ENST00000548421 ABCB1P08183 1280 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 ZGLP1P0C6A0 271 aa27■■□□□ 1.91
BRF1-213ENST00000548421 IGLV3-21P80748 117 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 HSPB3Q12988 150 aa27■■□□□ 1.91
BRF1-213ENST00000548421 ZNF551Q7Z340 670 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 CHST8Q9H2A9 424 aa27■■□□□ 1.91
BRF1-213ENST00000548421 LRMDAQ9H2I8 198 aa27■■□□□ 1.91
BRF1-213ENST00000548421 AKIRIN1Q9H9L7 192 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 GPN3Q9UHW5 284 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 C9J4A7 227 aa27■■□□□ 1.91
BRF1-213ENST00000548421 NVLO15381 856 aaKnown RBP27■■□□□ 1.91
BRF1-213ENST00000548421 GYG2O15488 501 aa27■■□□□ 1.91
BRF1-213ENST00000548421 MAOAP21397 527 aa27■■□□□ 1.91
BRF1-213ENST00000548421 PTPN6P29350 595 aa27■■□□□ 1.91
BRF1-213ENST00000548421 BIKQ13323 160 aa27■■□□□ 1.91
BRF1-213ENST00000548421 MLIPQ5VWP3 458 aa27■■□□□ 1.91
BRF1-213ENST00000548421 MRPL14Q6P1L8 145 aaKnown RBP27■■□□□ 1.91
BRF1-213ENST00000548421 PGAM4Q8N0Y7 254 aa27■■□□□ 1.91
BRF1-213ENST00000548421 PTCHD1Q96NR3 888 aa27■■□□□ 1.91
BRF1-213ENST00000548421 HOPXQ9BPY8 73 aaPredicted RBP27■■□□□ 1.91
BRF1-213ENST00000548421 VPS4AQ9UN37 437 aa27■■□□□ 1.91
BRF1-213ENST00000548421 ERVK-11Q9UQG0 969 aa27■■□□□ 1.91
BRF1-213ENST00000548421 PCDHB14Q9Y5E9 798 aa27■■□□□ 1.91
BRF1-213ENST00000548421 CLDN16Q9Y5I7 305 aa27■■□□□ 1.91
BRF1-213ENST00000548421 CCDC88CQ9P219 2028 aa27■■□□□ 1.91
BRF1-213ENST00000548421 OR2W5A6NFC9 320 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 VSTM2BA6NLU5 285 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 TGFBR3LH3BV60 316 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 GSNP06396 782 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 CCNYL3P0C7X3 344 aa26.99■■□□□ 1.91
BRF1-213ENST00000548421 HOXB9P17482 250 aaPredicted RBP26.99■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms