RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 PLSCR5A0PG75 271 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 LRRIQ4A6NIV6 560 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZSCAN5BA6NJL1 495 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 E9PBE3 544 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 OR4F21O95013 312 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CPNE6O95741 557 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 EPOP01588 193 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CSF2P04141 144 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZCCHC18P0CG32 403 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ITGA2P17301 1181 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 LHCGRP22888 699 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 FCARP24071 287 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 GJB2P29033 226 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ALDH1B1P30837 517 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CHI3L1P36222 383 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TAGLN2P37802 199 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 PTGFRP43088 359 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 BRWD1-AS2P59051 145 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ACTR3P61158 418 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CBX1P83916 185 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 GABPAQ06546 454 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF155Q12901 538 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ITGA9Q13797 1035 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 EXOSC7Q15024 291 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ANKRD55Q3KP44 614 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 KRTAP24-1Q3LI83 254 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF718Q3SXZ3 478 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 MPPE1Q53F39 396 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TDRD12Q587J7 1177 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF311Q5JNZ3 666 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 LYPLAL1Q5VWZ2 237 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 LIPKQ5VXJ0 399 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ZNF776Q68DI1 518 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 RTL6Q6ICC9 239 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 SLC27A4Q6P1M0 643 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 FAM171BQ6P995 826 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 BLOC1S2Q6QNY1 142 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 C17orf107Q6ZR85 190 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CYP4V2Q6ZWL3 525 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 C16orf82Q7Z2V1 217 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 COX8CQ7Z4L0 72 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 NBPF5PQ86XG9 351 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 KMT5CQ86Y97 462 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 GRAMD2AQ8IUY3 354 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 RCOR2Q8IZ40 523 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 EID3Q8N140 333 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 BBS5Q8N3I7 341 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 OR2T3Q8NH03 318 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 OR52N5Q8NH56 324 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 C4orf36Q96KX1 117 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TCEANC2Q96MN5 208 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 S1PR3Q99500 378 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 WRAP53Q9BUR4 548 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 NUSAP1Q9BXS6 441 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 MRPL13Q9BYD1 178 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 GSDMCQ9BYG8 508 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 A4GALTQ9NPC4 353 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TRPV5Q9NQA5 729 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TMEM30AQ9NV96 361 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 PLEK2Q9NYT0 353 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 SMARCAL1Q9NZC9 954 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 C19orf25Q9UFG5 118 aaPredicted RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CHRNA9Q9UGM1 479 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 IL36AQ9UHA7 158 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 MRPS33Q9Y291 106 aaKnown RBP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 DLGAP4Q9Y2H0 992 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 R4GN57 208 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 TTC21BQ7Z4L5 1316 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 NSD2O96028 1365 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 WRNQ14191 1432 aaPredicted RBP eCLIP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ATP10AO60312 1499 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.83□□□□□ -1.8
SCAF11-210ENST00000547654 ITSN2Q9NZM3 1697 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 PCNTO95613 3336 aa3.83□□□□□ -1.8
SCAF11-210ENST00000547654 CLTCQ00610 1675 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 KIF14Q15058 1648 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 FAM135BQ49AJ0 1406 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 A0A1W2PN81 502 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 C2CD4DB7Z1M9 353 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 ARPC1BO15143 372 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 KIF5CO60282 957 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 ANP32DO95626 131 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 IL1BP01584 269 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 LINC00271P0C7V0 271 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CD59P13987 128 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 NCF2P19878 526 aaPredicted RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 PAX7P23759 505 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 EPHA2P29317 976 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 PTPN6P29350 595 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 RBMS1P29558 406 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 AXLP30530 894 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 DUTP33316 252 aaKnown RBP3.82□□□□□ -1.8
SCAF11-210ENST00000547654 OR1D2P34982 312 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CHRNA7P36544 502 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 ACADSBP45954 432 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 AIF1P55008 147 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 CDH11P55287 796 aa3.82□□□□□ -1.8
SCAF11-210ENST00000547654 C1QTNF8P60827 252 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms