RNA–Protein interactions for RNA: ENST00000546893.5

SLC38A1-204, Transcript of solute carrier family 38 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC38A1, Length 2,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-204ENST00000546893 RGS5O15539 181 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 C1QBP02746 253 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 CCNYL3P0C7X3 344 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 DDX6P26196 483 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 GABRR2P28476 465 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 GSTM5P46439 218 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 LIMK1P53667 647 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 S100A12P80511 92 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 SPIBQ01892 262 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 RGS1Q08116 209 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 BTN1A1Q13410 526 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 NAE1Q13564 534 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 HENMT1Q5T8I9 393 aaKnown RBP13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 MEDAGQ5VYS4 303 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 RNLSQ5VYX0 342 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 C19orf48Q6RUI8 117 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 CCDC149Q6ZUS6 474 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 CCDC190Q86UF4 302 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 LGI4Q8N135 537 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 NAGSQ8N159 534 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 IL17RCQ8NAC3 791 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.1□□□□□ -0.318e-8■■□□□ 13.5
SLC38A1-204ENST00000546893 BTN2A2Q8WVV5 523 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 AKAP1Q92667 903 aaKnown RBP eCLIP13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 KLHL15Q96M94 604 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 MTERF1Q99551 399 aaKnown RBP13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 SEC22CQ9BRL7 303 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 ZCCHC2Q9C0B9 1178 aaKnown RBP13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 IFT46Q9NQC8 304 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
SLC38A1-204ENST00000546893 CCNB2O95067 398 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 CRATP43155 626 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 XCR1P46094 333 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 LIMS1P48059 325 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 RGS6P49758 472 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 ZXDBP98169 803 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 BAMBIQ13145 260 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 SLCO4C1Q6ZQN7 724 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 GPAT4Q86UL3 456 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 PM20D2Q8IYS1 436 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 SLC5A8Q8N695 610 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 OR8H1Q8NGG4 311 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 HUS1BQ8NHY5 278 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 PPCDCQ96CD2 204 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 KCNC2Q96PR1 638 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 SLC35A5Q9BS91 424 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 RHNO1Q9BSD3 238 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 CFHR5Q9BXR6 569 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 C3orf14Q9HBI5 128 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 SPG21Q9NZD8 308 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 SH3BP4Q9P0V3 963 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 ICKQ9UPZ9 632 aa13.09□□□□□ -0.31
SLC38A1-204ENST00000546893 A0A1W2PRG6 482 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 PRR23AA6NEV1 266 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 B3GALT4O96024 378 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 ARAFP10398 606 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 GADD45AP24522 165 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 EPHA2P29317 976 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 TIE1P35590 1138 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 CRYBA2P53672 197 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 CDK6Q00534 326 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 SPANXN2Q5MJ10 180 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 OR8H2Q8N162 312 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 RIT1Q92963 219 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 TRNT1Q96Q11 434 aaKnown RBP13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 DCAF16Q9NXF7 216 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 AHSPQ9NZD4 102 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 TRAPPC4Q9Y296 219 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 CSNK1G3Q9Y6M4 447 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 ENPP4Q9Y6X5 453 aa13.08□□□□□ -0.31
SLC38A1-204ENST00000546893 OBSL1O75147 1896 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 PIKFYVEQ9Y2I7 2098 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 UPK3BL1B0FP48 263 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 TMEM229AB2RXF0 380 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 UPK3BL2E5RIL1 263 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 LEFTY2O00292 366 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 TBX19O60806 448 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 PDE9AO76083 593 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 ADAP00813 363 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 PROS1P07225 676 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 ALAS2P22557 587 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 IMPA1P29218 277 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 PPM1AP35813 382 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 NNMTP40261 264 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 MVDP53602 400 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 SMIM11AP58511 58 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 GAB1Q13480 694 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 DDX39BQ13838 428 aaKnown RBP13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 ZNF273Q14593 569 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 ARMCX4Q5H9R4 360 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 SPOUT1Q5T280 376 aaKnown RBP13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 TIGD3Q6B0B8 471 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 CORO6Q6QEF8 472 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 PAMR1Q6UXH9 720 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 DPPA4Q7L190 304 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 TRIM48Q8IWZ4 208 aa13.08□□□□□ -0.32
SLC38A1-204ENST00000546893 HS6ST3Q8IZP7 471 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms