RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 SERPINB8P50452 374 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 NR0B1P51843 470 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 HNRNPH2P55795 449 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 GUCY2DQ02846 1103 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 TLE4Q04727 773 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 TBL3Q12788 808 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 TRADDQ15628 312 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 UAP1Q16222 522 aaPredicted RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 C18orf63Q68DL7 685 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 C8orf74Q6P047 294 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 SYT10Q6XYQ8 523 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 SLC29A4Q7RTT9 530 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 DND1Q8IYX4 353 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 RPRMLQ8N4K4 120 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 MRRFQ96E11 262 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 TREX2Q9BQ50 279 aaPredicted RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 CNPPD1Q9BV87 410 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 WDR41Q9HAD4 459 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 PNPLA3Q9NST1 481 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 RYDENQ9NUL5 291 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 ATG4BQ9Y4P1 393 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 TNPO3Q9Y5L0 923 aaKnown RBP17.31■□□□□ 0.36
CHPT1-202ENST00000546490 LIPGQ9Y5X9 500 aa17.31■□□□□ 0.36
CHPT1-202ENST00000546490 A0A096LPK6 155 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 ESYT3A0FGR9 886 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 KLK8O60259 260 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 OR10H2O60403 315 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 PRKRAO75569 313 aaKnown RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 KLHL2O95198 593 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 NR2F6P10588 404 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CAPN3P20807 821 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 PTX3P26022 381 aaPredicted RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 ACVR2AP27037 513 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 NUP107P57740 925 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CKAP4Q07065 602 aaKnown RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CUL3Q13618 768 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 GTF2H2Q13888 395 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 PCBP2Q15366 365 aaKnown RBP eCLIP17.3■□□□□ 0.364e-8■■□□□ 11.8
CHPT1-202ENST00000546490 CPSF6Q16630 551 aaKnown RBP eCLIP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 HYAL4Q2M3T9 481 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 SPRED3Q2MJR0 410 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 PIGGQ5H8A4 983 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 GTF2H2CQ6P1K8 395 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CYP20A1Q6UW02 462 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 RNF111Q6ZNA4 994 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 TRILQ7L0X0 811 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 GOLGA7Q7Z5G4 137 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 NUDT13Q86X67 352 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 SLC15A4Q8N697 577 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 LILRB4Q8NHJ6 448 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 PPWD1Q96BP3 646 aaKnown RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 SPACA9Q96E40 222 aaPredicted RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 GAL3ST4Q96RP7 486 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 LDAHQ9H6V9 325 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 MCCC2Q9HCC0 563 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 KCNJ16Q9NPI9 418 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 TUBA8Q9NY65 449 aaPredicted RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CPSF2Q9P2I0 782 aaKnown RBP17.3■□□□□ 0.36
CHPT1-202ENST00000546490 CCDC168Q8NDH2 2452 aa17.3■□□□□ 0.36
CHPT1-202ENST00000546490 A0A0A6YYD5 115 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 IQANK1A0A1B0GTG1 560 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 A0A1B0GVC2 190 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 NKX2-6A6NCS4 301 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 FOXO6A8MYZ6 492 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 HRKO00198 91 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 AQP7O14520 342 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 SUSD5O60279 629 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 IGFBP2P18065 325 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 TYK2P29597 1187 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ARL1P40616 181 aaPredicted RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 MAN2A2P49641 1150 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 HERVK_113P63132 956 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ERVK-8P63133 956 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 KCNJ2P63252 427 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 PMPCAQ10713 525 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 FOXO1Q12778 655 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ZNF791Q3KP31 576 aaPredicted RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 GXYLT1Q4G148 440 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 METTL2BQ6P1Q9 378 aaKnown RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 DGAT2L6Q6ZPD8 337 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 OR5M9Q8NGP3 310 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 SARAFQ96BY9 339 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ERVK-6Q9BXR3 956 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ZNF717Q9BY31 904 aaPredicted RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 IPPKQ9H8X2 491 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 BOKQ9UMX3 212 aaPredicted RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ERVK-19Q9WJR5 959 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.29■□□□□ 0.36
CHPT1-202ENST00000546490 F8P00451 2351 aa17.29■□□□□ 0.36
CHPT1-202ENST00000546490 ATP6AP2A0A1C7CYW4 349 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 HMX2A2RU54 273 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 LRRC14BA6NHZ5 514 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 OR6C76A6NM76 312 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 PROM1O43490 865 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 EEDO75530 441 aaKnown RBP17.28■□□□□ 0.36
CHPT1-202ENST00000546490 ATP6AP2O75787 350 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 NADKO95544 446 aaPredicted RBP17.28■□□□□ 0.36
CHPT1-202ENST00000546490 GPR75O95800 540 aa17.28■□□□□ 0.36
CHPT1-202ENST00000546490 ALDOAP04075 364 aaKnown RBP17.28■□□□□ 0.36
CHPT1-202ENST00000546490 FREM3P0C091 2139 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms