RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 NDRG2Q9UN36 371 aaKnown RBP13.96□□□□□ -0.17
HOXC11-202ENST00000546378 F11P03951 625 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 JUNDP17535 347 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 DRD5P21918 477 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 CPN2P22792 545 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 PSMB5P28074 263 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 CCT3P49368 545 aaKnown RBP13.96□□□□□ -0.18
HOXC11-202ENST00000546378 FCHO2Q0JRZ9 810 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 POU4F3Q15319 338 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 CRB2Q5IJ48 1285 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 FAM27D1Q5T7N8 215 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 SLC38A6Q8IZM9 456 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 ST6GAL2Q96JF0 529 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 FCRL4Q96PJ5 515 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 F2RL3Q96RI0 385 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 MAGIXQ9H6Y5 334 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 CLCA2Q9UQC9 943 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 HCN4Q9Y3Q4 1203 aa13.96□□□□□ -0.18
HOXC11-202ENST00000546378 MAGEB4O15481 346 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ATP1B2P14415 290 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 LAG3P18627 525 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ALAS2P22557 587 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SRP9P49458 86 aaKnown RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 GZMMP51124 257 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 METAP1P53582 386 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CSNK2BP67870 215 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 GINS1Q14691 196 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 GPAT3Q53EU6 434 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ARSIQ5FYB1 569 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 BCL2L15Q5TBC7 163 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 FRMPD2BQ6IN97 320 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 NOXA1Q86UR1 476 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CALHM3Q86XJ0 350 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ASB15Q8WXK1 588 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CLP1Q92989 425 aaKnown RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CCDC177Q9NQR7 707 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ASF1AQ9Y294 204 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 KCNE2Q9Y6J6 123 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ISPDA4D126 451 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ANTXRLA6NF34 631 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 EIF3FO00303 357 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SCAMP2O15127 329 aaKnown RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 PRMT3O60678 531 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 OR12D1P0DN82 309 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CLDN2P57739 230 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 PFN3P60673 137 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 GALK2Q01415 458 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 PTSQ03393 145 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SYPL1Q16563 259 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SLC8B1Q6J4K2 584 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SLC30A6Q6NXT4 461 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CDH24Q86UP0 819 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 MINDY2Q8NBR6 621 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SLC37A3Q8NCC5 494 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 GCDHQ92947 438 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 USP7Q93009 1102 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 MSANTD3Q96H12 275 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 OPALINQ96PE5 141 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 MCCC1Q96RQ3 725 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 NELL2Q99435 816 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 NTMT1Q9BV86 223 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 SLC29A3Q9BZD2 475 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 NANSQ9NR45 359 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 RUVBL1Q9Y265 456 aaKnown RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 POFUT2Q9Y2G5 429 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CMAHPQ9Y471 501 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 POM121CA8CG34 1229 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 CCL16O15467 120 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 HBQ1P09105 142 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 EPHB3P54753 998 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 TBCEQ15813 527 aaPredicted RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 PXDC1Q5TGL8 231 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 TRIM40Q6P9F5 258 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ESPNLQ6ZVH7 1005 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 HSD11B1LQ7Z5J1 315 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 LAPTM4BQ86VI4 370 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 MARCH9Q86YJ5 346 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 LACC1Q8IV20 430 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 UBQLNLQ8IYU4 475 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 PPIL3Q9H2H8 161 aaKnown RBP13.95□□□□□ -0.18
HOXC11-202ENST00000546378 HHATLQ9HCP6 504 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ZDHHC3Q9NYG2 299 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 ZNF224Q9NZL3 707 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 MKLN1Q9UL63 735 aa13.95□□□□□ -0.18
HOXC11-202ENST00000546378 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 ERVH48-1M5A8F1 160 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 GCM2O75603 506 aaPredicted RBP13.94□□□□□ -0.18
HOXC11-202ENST00000546378 OR2B3O76000 313 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 PAHP00439 452 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 ATF4P18848 351 aaPredicted RBP13.94□□□□□ -0.18
HOXC11-202ENST00000546378 NNMTP40261 264 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 ZNF91Q05481 1191 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 GRIN2CQ14957 1233 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 TIMM50Q3ZCQ8 353 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 PLAG1Q6DJT9 500 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 CNIH2Q6PI25 160 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 UNC5DQ6UXZ4 953 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 TMCO6Q96DC7 493 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 MAP6Q96JE9 813 aa13.94□□□□□ -0.18
HOXC11-202ENST00000546378 OR4K3Q96R72 315 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms