RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 LCN10Q6JVE6 187 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 FAM199XQ6PEV8 388 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SCIMPQ6UWF3 145 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 RGS9BPQ6ZS82 235 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 COMMD6Q7Z4G1 85 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 PROSER1Q86XN7 944 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZC3H7AQ8IWR0 971 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 DDIASQ8IXT1 998 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ENDOVQ8N8Q3 282 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 OR5T3Q8NGG3 340 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ADAMTS18Q8TE60 1221 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 CKAP2Q8WWK9 683 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF75CPQ92670 426 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 RGMAQ96B86 450 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MTFMTQ96DP5 389 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SMIM10Q96HG1 83 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 NAF1Q96HR8 494 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MAGEB18Q96M61 343 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 C7orf26Q96N11 449 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 QRFPRQ96P65 431 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SERINC2Q96SA4 455 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 TBCDQ9BTW9 1192 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SORBS1Q9BX66 1292 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MRPL1Q9BYD6 325 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ROGDIQ9GZN7 287 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 C20orf27Q9GZN8 174 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ILKAPQ9H0C8 392 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SLC26A1Q9H2B4 701 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 TUBB1Q9H4B7 451 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MANSC1Q9H8J5 431 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 WDR54Q9H977 334 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 AKIRIN1Q9H9L7 192 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 GPN2Q9H9Y4 310 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF304Q9HCX3 659 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SLCO1B3Q9NPD5 702 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 MKKSQ9NPJ1 570 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 SLC22A11Q9NSA0 550 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 C14orf105Q9NVL8 296 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 PSD3Q9NYI0 1048 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 TRPC4Q9UBN4 977 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 VPS29Q9UBQ0 182 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZNF282Q9UDV7 671 aaPredicted RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ZDHHC2Q9UIJ5 367 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 NXT1Q9UKK6 140 aaKnown RBP5.97□□□□□ -1.45
PRKDC-211ENST00000546304 PADI1Q9ULC6 663 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 TRAF6Q9Y4K3 522 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 DNAJC15Q9Y5T4 150 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 CNTRLQ7Z7A1 2325 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 ATRXP46100 2492 aa5.97□□□□□ -1.45
PRKDC-211ENST00000546304 BSNQ9UPA5 3926 aa5.96□□□□□ -1.45
PRKDC-211ENST00000546304 DOCK10Q96BY6 2186 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 MED13Q9UHV7 2174 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 IGLV3-12A0A075B6K2 115 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 A0A0A6YYD5 115 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 LOC101059948A0A1B0GTJ6 334 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 ARHGAP10A1A4S6 786 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 NPIPB8E9PQR5 432 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PSMD12O00232 456 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 KLK10O43240 276 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RGS14O43566 566 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 TMPRSS11DO60235 418 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PCDH7O60245 1069 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PSPNO60542 156 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 CNOT3O75175 753 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 EEDO75530 441 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 ONECUT2O95948 504 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 GSNP06396 782 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RAB40ALP0C0E4 278 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 NR2F6P10588 404 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PIM1P11309 404 aaPredicted RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RNH1P13489 461 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 LIFP15018 202 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 TCN2P20062 427 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PRPH2P23942 346 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 ATP5A1P25705 553 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 TIA1P31483 386 aaKnown RBP eCLIP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 BSGP35613 385 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 XCR1P46094 333 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 GIPRP48546 466 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RPL14P50914 215 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 FOXL2P58012 376 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RPS18P62269 152 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 RPL38P63173 70 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 GUCY1A3Q02108 690 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 TNFRSF17Q02223 184 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 OCA2Q04671 838 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 ACSM2AQ08AH3 577 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 TBL3Q12788 808 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 SRSF6Q13247 344 aaKnown RBP5.96□□□□□ -1.46
PRKDC-211ENST00000546304 AP5B1Q2VPB7 878 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 UGT3A2Q3SY77 523 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 SPDYAQ5MJ70 313 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 ACSM2BQ68CK6 577 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 FAM47EQ6ZV65 393 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 OVCH1Q7RTY7 1134 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PAGE2Q7Z2X7 111 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 CRLF3Q8IUI8 442 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 PRSS58Q8IYP2 241 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 CLYBLQ8N0X4 340 aa5.96□□□□□ -1.46
PRKDC-211ENST00000546304 CA13Q8N1Q1 262 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms