RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 C19orf60Q96EN9 201 aa16.35■□□□□ 0.21
CD9-211ENST00000546073 BBS4Q96RK4 519 aa16.35■□□□□ 0.21
CD9-211ENST00000546073 PRPF18Q99633 342 aaKnown RBP16.35■□□□□ 0.21
CD9-211ENST00000546073 OR8D2Q9GZM6 311 aa16.35■□□□□ 0.21
CD9-211ENST00000546073 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.35■□□□□ 0.21
CD9-211ENST00000546073 TEX10Q9NXF1 929 aaPredicted RBP16.35■□□□□ 0.21
CD9-211ENST00000546073 UTS2RQ9UKP6 389 aa16.35■□□□□ 0.21
CD9-211ENST00000546073 MAPRE3Q9UPY8 281 aa16.35■□□□□ 0.21
CD9-211ENST00000546073 POLR3HQ9Y535 204 aaPredicted RBP16.35■□□□□ 0.21
CD9-211ENST00000546073 TRBV11-1A0A0K0K1C0 115 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 ITM2AO43736 263 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 PEX11AO75192 247 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 LYPLA1O75608 230 aaPredicted RBP16.34■□□□□ 0.21
CD9-211ENST00000546073 ITGAMP11215 1152 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 PCSK2P16519 638 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 NTSP30990 170 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 WDR4P57081 412 aaKnown RBP16.34■□□□□ 0.21
CD9-211ENST00000546073 PDCD2Q16342 344 aaPredicted RBP16.34■□□□□ 0.21
CD9-211ENST00000546073 TTMPQ5BVD1 217 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 HLA-DQA1Q5Y7H0 255 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 SLC29A4Q7RTT9 530 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 R3HCC1LQ7Z5L2 792 aaKnown RBP16.34■□□□□ 0.21
CD9-211ENST00000546073 RPS19BP1Q86WX3 136 aaKnown RBP16.34■□□□□ 0.21
CD9-211ENST00000546073 GALNT12Q8IXK2 581 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 LGI4Q8N135 537 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 ZNF781Q8N8C0 355 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 OR6Y1Q8NGX8 325 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 DNAJB14Q8TBM8 379 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 CNPPD1Q9BV87 410 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 EHD3Q9NZN3 535 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 CFL2Q9Y281 166 aa16.34■□□□□ 0.21
CD9-211ENST00000546073 MYOCOSA0A1B0GUC4 107 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 TMEM233B4DJY2 109 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 NPIPB8E9PQR5 432 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 MASP2O00187 686 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 PGRMC2O15173 223 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 PRPS2P11908 318 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 HPCAL1P37235 193 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 OC90Q02509 493 aaPredicted RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 ZNF267Q14586 743 aaPredicted RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 TLR1Q15399 786 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 SOWAHCQ53LP3 525 aaPredicted RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 PTRH1Q86Y79 214 aaKnown RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 LRRC25Q8N386 305 aaPredicted RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 NCLNQ969V3 563 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 PPWD1Q96BP3 646 aaKnown RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 WDR77Q9BQA1 342 aaPredicted RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 UTP23Q9BRU9 249 aaKnown RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 CDCP1Q9H5V8 836 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 TNFRSF12AQ9NP84 129 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 MYNNQ9NPC7 610 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 MED4Q9NPJ6 270 aa16.33■□□□□ 0.2
CD9-211ENST00000546073 RYDENQ9NUL5 291 aaKnown RBP16.33■□□□□ 0.2
CD9-211ENST00000546073 KLF11O14901 512 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 LSM1O15116 133 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 PRKRAO75569 313 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 BCAS2O75934 225 aaPredicted RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 CPMP14384 443 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 DSPP15924 2871 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 NR1D1P20393 614 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 DDCP20711 480 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 IGLV3-21P80748 117 aaPredicted RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 Q0VFX4 171 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 SMU1Q2TAY7 513 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 UGT3A2Q3SY77 523 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ACER2Q5QJU3 275 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 IGFL3Q6UXB1 125 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 RNF111Q6ZNA4 994 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 Q6ZSR9 355 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 WDR75Q8IWA0 830 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 TMEM156Q8N614 296 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 OR1N1Q8NGS0 311 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ZFP28Q8NHY6 868 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 SLC2A12Q8TD20 617 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ELP5Q8TE02 316 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ZNF75CPQ92670 426 aaPredicted RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 TMEM125Q96AQ2 219 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 EXOSC8Q96B26 276 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 SENP5Q96HI0 755 aaPredicted RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 BRINP2Q9C0B6 783 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ATAD3AQ9NVI7 634 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 NOP53Q9NZM5 478 aaKnown RBP16.32■□□□□ 0.2
CD9-211ENST00000546073 MAP10Q9P2G4 905 aa16.32■□□□□ 0.2
CD9-211ENST00000546073 ATP6AP2A0A1C7CYW4 349 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 OR6C76A6NM76 312 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 HDAC3O15379 428 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 ATP6AP2O75787 350 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 KITP10721 976 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 FEN1P39748 380 aaKnown RBP16.31■□□□□ 0.2
CD9-211ENST00000546073 EFNA3P52797 238 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 RAE1P78406 368 aaKnown RBP16.31■□□□□ 0.2
CD9-211ENST00000546073 RPS6KA2Q15349 733 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 SHISA5Q8N114 240 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 NATD1Q8N6N6 113 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 OR8K3Q8NH51 312 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 PTPMT1Q8WUK0 201 aaPredicted RBP16.31■□□□□ 0.2
CD9-211ENST00000546073 PPCDCQ96CD2 204 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 FBXL20Q96IG2 436 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 PPP1R36Q96LQ0 422 aa16.31■□□□□ 0.2
CD9-211ENST00000546073 MESP1Q9BRJ9 268 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms