RNA–Protein interactions for RNA: ENST00000545856.5

PRPF40A-212, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-212ENST00000545856 GK5Q6ZS86 529 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 CCDC121Q6ZUS5 278 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 GALNT6Q8NCL4 622 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 ZNF675Q8TD23 568 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 CNRIP1Q96F85 164 aaPredicted RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 ZNF681Q96N22 645 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 PHF12Q96QT6 1004 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 ASCL3Q9NQ33 180 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 SEMA3GQ9NS98 782 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 RYDENQ9NUL5 291 aaKnown RBP15.05■□□□□ -0
PRPF40A-212ENST00000545856 TAS2R9Q9NYW1 312 aa15.05■□□□□ -0
PRPF40A-212ENST00000545856 A0A096LPI6 279 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 A0A1W2PRB8 838 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 PGRMC2O15173 223 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 UBOX5O94941 541 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 SOX30O94993 753 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 KCNH1O95259 989 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 KRT16P08779 473 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 STT3AP46977 705 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 XKP51811 444 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 FOLH1Q04609 750 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 VPS26BQ4G0F5 336 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 C6orf163Q5TEZ5 329 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 OR4F3Q6IEY1 312 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 FOXR1Q6PIV2 292 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 METTL27Q8N6F8 245 aaPredicted RBP15.04■□□□□ -0
PRPF40A-212ENST00000545856 OR2Y1Q8NGV0 311 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 GTF2H4Q92759 462 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 PMEPA1Q969W9 287 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 EXOSC8Q96B26 276 aaKnown RBP15.04■□□□□ -0
PRPF40A-212ENST00000545856 AMDHD1Q96NU7 426 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 SPSB2Q99619 263 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 SH3GL1Q99961 368 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 HOPXQ9BPY8 73 aaPredicted RBP15.04■□□□□ -0
PRPF40A-212ENST00000545856 CHST8Q9H2A9 424 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 KCND3Q9UK17 655 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 CORO2BQ9UQ03 480 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 PCDHGA6Q9Y5G7 932 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 SPEGQ15772 3267 aa15.04■□□□□ -0
PRPF40A-212ENST00000545856 A0A087WV62 115 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 A0A1W2PQ72 361 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 TCRBV16S1A1N1A0A5B0 115 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 PLOD2O00469 737 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 RFXANKO14593 260 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 MRASO14807 208 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 FGF17O60258 216 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ERAL1O75616 437 aaKnown RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 RECKO95980 971 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 LIPCP11150 499 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 SLC5A2P31639 672 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 STAT5AP42229 794 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 MANFP55145 182 aaKnown RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 RPS15P62841 145 aaKnown RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 RHAGQ02094 409 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 SPRED3Q2MJR0 410 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 SPATS1Q496A3 300 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ZNF385BQ569K4 471 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 REP15Q6BDI9 236 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 C16orf89Q6UX73 402 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ARHGAP24Q8N264 748 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 SFXN5Q8TD22 340 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 METTL21AQ8WXB1 218 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ANKRD9Q96BM1 317 aaPredicted RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 RBM18Q96H35 190 aaKnown RBP15.03■□□□□ -0
PRPF40A-212ENST00000545856 ART5Q96L15 291 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 PANX1Q96RD7 426 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 YIPF2Q9BWQ6 316 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 RAD21L1Q9H4I0 556 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ADAP2Q9NPF8 381 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 ARL8BQ9NVJ2 186 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 FOXJ2Q9P0K8 574 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 CTSFQ9UBX1 484 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 CCDC88CQ9P219 2028 aa15.03■□□□□ -0
PRPF40A-212ENST00000545856 LOC100653049A0A140TA62 436 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 FAM149AA5PLN7 773 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 RAD1O60671 282 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 B4GALT2O60909 372 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 BCAS2O75934 225 aaPredicted RBP15.02■□□□□ -0
PRPF40A-212ENST00000545856 KRT34O76011 436 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 DGKQP52824 942 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 PHC1P78364 1004 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 PRR5P85299 388 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 ART3Q13508 389 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 ELAVL1Q15717 326 aaKnown RBP15.02■□□□□ -0
PRPF40A-212ENST00000545856 ZSCAN26Q16670 478 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 SYT16Q17RD7 645 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 MINDY4Q4G0A6 757 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 DNAL1Q4LDG9 190 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 LACTB2Q53H82 288 aaPredicted RBP15.02■□□□□ -0
PRPF40A-212ENST00000545856 DHDDSQ86SQ9 333 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 DTX1Q86Y01 620 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 DTWD1Q8N5C7 304 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 OR14A16Q8NHC5 309 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 VPS33AQ96AX1 596 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 PTCHD1Q96NR3 888 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 IP6K3Q96PC2 410 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 SERHLQ9NQF3 203 aa15.02■□□□□ -0
PRPF40A-212ENST00000545856 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.02■□□□□ -0
PRPF40A-212ENST00000545856 NTMQ9P121 344 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms