RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 MTG2Q9H4K7 406 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 ACAD8Q9UKU7 415 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 NCOR1O75376 2440 aa22.09■■□□□ 1.13
FOXA1-202ENST00000545425 NUP210Q8TEM1 1887 aaPredicted RBP22.09■■□□□ 1.13
FOXA1-202ENST00000545425 C1QTNF3-AMACRE9PGA6 284 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 MBTPS2O43462 519 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 ADAM23O75077 832 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 MFN2O95140 757 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 NFATC1O95644 943 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 PTHP01270 115 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 ENDOUP21128 410 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 PCBP4P57723 403 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 DEFA1P59665 94 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 DEFA3P59666 94 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 COX10Q12887 443 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 SMAD2Q15796 467 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 FNDC3BQ53EP0 1204 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 DCST1Q5T197 706 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 C11orf96Q7Z7L8 435 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 SMRP1Q8NCR6 262 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 TTLQ8NG68 377 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 OR5AK3PQ8NH89 298 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 OR5K2Q8NHB8 316 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 CXorf40AQ8TE69 158 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 NR4A3Q92570 626 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 TRNT1Q96Q11 434 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 CDADC1Q9BWV3 514 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 ARMC7Q9H6L4 198 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 SLC25A19Q9HC21 320 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 EHD3Q9NZN3 535 aa22.08■■□□□ 1.13
FOXA1-202ENST00000545425 RPL36Q9Y3U8 105 aaKnown RBP22.08■■□□□ 1.13
FOXA1-202ENST00000545425 ATG2AQ2TAZ0 1938 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 SAP18O00422 153 aaKnown RBP22.08■■□□□ 1.12
FOXA1-202ENST00000545425 PLPP1O14494 284 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 ZW10O43264 779 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 AQP9O43315 295 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 GBAP04062 536 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 DRD2P14416 443 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 CSTF2P33240 577 aaKnown RBP eCLIP22.08■■□□□ 1.12
FOXA1-202ENST00000545425 BSGP35613 385 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 ARFIP1P53367 373 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 COPZ1P61923 177 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 GNA13Q14344 377 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 CD300LDQ6UXZ3 194 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 SLC22A16Q86VW1 577 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 SLC38A5Q8WUX1 472 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 CHAC2Q8WUX2 184 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 TFGQ92734 400 aaPredicted RBP22.08■■□□□ 1.12
FOXA1-202ENST00000545425 RGMAQ96B86 450 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 EFHD2Q96C19 240 aaPredicted RBP22.08■■□□□ 1.12
FOXA1-202ENST00000545425 MGLLQ99685 303 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 C3orf14Q9HBI5 128 aa22.08■■□□□ 1.12
FOXA1-202ENST00000545425 CFAP20Q9Y6A4 193 aaKnown RBP22.08■■□□□ 1.12
FOXA1-202ENST00000545425 TLR4O00206 839 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 KDM1AO60341 852 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 H1F0P07305 194 aaKnown RBP22.07■■□□□ 1.12
FOXA1-202ENST00000545425 TEAD1P28347 426 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 KCNJ5P48544 419 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 NFE2L1Q14494 772 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 POM121L1PQ3SYA9 428 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 SLC25A30Q5SVS4 291 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 C12orf73Q69YU5 71 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 KIAA1211LQ6NV74 962 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 LRRTM4Q86VH4 590 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 CADM3Q8N126 398 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 FLCNQ8NFG4 579 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 KLHL6Q8WZ60 621 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 CCDC32Q9BV29 185 aa22.07■■□□□ 1.12
FOXA1-202ENST00000545425 ZNF717Q9BY31 904 aaPredicted RBP22.07■■□□□ 1.12
FOXA1-202ENST00000545425 SCHIP1Q9P0W5 487 aaPredicted RBP22.07■■□□□ 1.12
FOXA1-202ENST00000545425 PNMA8BQ9ULN7 279 aaPredicted RBP22.07■■□□□ 1.12
FOXA1-202ENST00000545425 J3KTA2 159 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 DSCR3O14972 297 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 RECKO95980 971 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 GASTP01350 101 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 DBTP11182 482 aaKnown RBP22.06■■□□□ 1.12
FOXA1-202ENST00000545425 OCLNQ16625 522 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 ANKRD54Q6NXT1 300 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 OR8J1Q8NGP2 316 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 GTPBP3Q969Y2 492 aaKnown RBP22.06■■□□□ 1.12
FOXA1-202ENST00000545425 TMEM19Q96HH6 336 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 TAPBPLQ9BX59 468 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 C6orf62Q9GZU0 229 aaPredicted RBP22.06■■□□□ 1.12
FOXA1-202ENST00000545425 P2RX2Q9UBL9 471 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 ZNF229Q9UJW7 825 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 SNX8Q9Y5X2 465 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 HCFC2Q9Y5Z7 792 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 IRGMA1A4Y4 181 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 ATP6V1G1O75348 118 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 SCG5P05408 212 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 PPP2R1BP30154 601 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 CNR2P34972 360 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 GSSP48637 474 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 NUDT6P53370 316 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 PUM1Q14671 1186 aaKnown RBP eCLIP22.06■■□□□ 1.12
FOXA1-202ENST00000545425 PRSS53Q2L4Q9 553 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 SPDYE7PQ495Y7 208 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 PRAMEF8Q5VWM4 474 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 PRAMEF7Q5VXH5 474 aa22.06■■□□□ 1.12
FOXA1-202ENST00000545425 C6orf120Q7Z4R8 191 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms