RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 FPGSQ05932 587 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CAMK1Q14012 370 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 KLHL6Q8WZ60 621 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 HERVK_113Q902F9 699 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CAMK1GQ96NX5 476 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 MGLLQ99685 303 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CCDC32Q9BV29 185 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 ANKRD19PQ9H560 264 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 MVB12BQ9H7P6 319 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 ZBTB20Q9HC78 741 aaPredicted RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 LHX9Q9NQ69 397 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 PRDM9Q9NQV7 894 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SEMA3GQ9NS98 782 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CRNNQ9UBG3 495 aaPredicted RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 REV1Q9UBZ9 1251 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 AASSQ9UDR5 926 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 SNX8Q9Y5X2 465 aa11.82□□□□□ -0.52
PAAF1-215ENST00000544909 CFAP20Q9Y6A4 193 aaKnown RBP11.82□□□□□ -0.52
PAAF1-215ENST00000544909 HEPACAM2A8MVW5 462 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 LOC110117498-PIK3R3F6TDL0 507 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TLR4O00206 839 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TOR1BO14657 336 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 FFAR1O14842 300 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 AXIN1O15169 862 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 ASNA1O43681 348 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PTHP01270 115 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 GASTP01350 101 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 ACADMP11310 421 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TNFRSF1BP20333 461 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CSTF2P33240 577 aaKnown RBP eCLIP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 METAP1P53582 386 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PRSS53Q2L4Q9 553 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SPDYE7PQ495Y7 208 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 OR4C11Q6IEV9 310 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 FAM26EQ8N5C1 309 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 FLCNQ8NFG4 579 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PROKR2Q8NFJ6 384 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 GPR32P1Q8NGA4 272 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 OR56A1Q8NGH5 318 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 OR2L8Q8NGY9 312 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SUN3Q8TAQ9 357 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 ING5Q8WYH8 240 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PIK3R3Q92569 461 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 RSPRY1Q96DX4 576 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TREX2Q9BQ50 279 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 MND1Q9BWT6 205 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CDADC1Q9BWV3 514 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 POLDIP3Q9BY77 421 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 MTIF3Q9H2K0 278 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 WDR26Q9H7D7 661 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SYNDIG1Q9H7V2 258 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PRSS16Q9NQE7 514 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PHPT1Q9NRX4 125 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CALML5Q9NZT1 146 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SEC14L3Q9UDX4 400 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 LINC01553A4QN01 128 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PRR19A6NJB7 356 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SNTNA6NMZ2 147 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 J3KTA2 159 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 UGT2B17O75795 530 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 ALDH4A1P30038 563 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CNR2P34972 360 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PSMD7P51665 324 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 LIM2P55344 173 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 LSM3P62310 102 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CSNK1G2P78368 415 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 C1DQ13901 141 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TMEM44Q2T9K0 475 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TMEM240Q5SV17 173 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TPRG1LQ5T0D9 272 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CASP12Q6UXS9 341 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 Q6ZPB1 254 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 BTLAQ7Z6A9 289 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 ATCAYQ86WG3 371 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 MMAAQ8IVH4 418 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TOR1AIP2Q8NFQ8 470 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 CHAC2Q8WUX2 184 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SLC35G5Q96KT7 338 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 IL17FQ96PD4 163 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 F2RL3Q96RI0 385 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PRRG3Q9BZD7 231 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 RSPH9Q9H1X1 276 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SFXN1Q9H9B4 322 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 SLC35C2Q9NQQ7 365 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TRNAU1APQ9NX07 287 aaKnown RBP11.81□□□□□ -0.52
PAAF1-215ENST00000544909 PRKAG2Q9UGJ0 569 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 TRAPPC4Q9Y296 219 aa11.81□□□□□ -0.52
PAAF1-215ENST00000544909 A0A0G2JPF8 293 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 TRBV4-1A0A0J9YWV2 114 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 LRIT2A6NDA9 550 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 HNRNPCL2B2RXH8 293 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 HNRNPCL3B7ZW38 293 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 HNRNPCL4P0DMR1 293 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 C5AR1P21730 350 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 PKLRP30613 574 aa11.8□□□□□ -0.52
PAAF1-215ENST00000544909 IFNGR2P38484 337 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms